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3FMZ

Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand

Functional Information from GO Data
ChainGOidnamespacecontents
A0001654biological_processeye development
A0002639biological_processpositive regulation of immunoglobulin production
A0005501molecular_functionretinoid binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006094biological_processgluconeogenesis
A0007507biological_processheart development
A0007601biological_processvisual perception
A0016918molecular_functionretinal binding
A0019841molecular_functionretinol binding
A0030277biological_processmaintenance of gastrointestinal epithelium
A0030324biological_processlung development
A0032024biological_processpositive regulation of insulin secretion
A0032526biological_processresponse to retinoic acid
A0034632molecular_functionretinol transmembrane transporter activity
A0034633biological_processretinol transport
A0042572biological_processretinol metabolic process
A0042593biological_processglucose homeostasis
A0048562biological_processembryonic organ morphogenesis
A0048706biological_processembryonic skeletal system development
A0048738biological_processcardiac muscle tissue development
A0048807biological_processfemale genitalia morphogenesis
A0060044biological_processnegative regulation of cardiac muscle cell proliferation
A0060059biological_processembryonic retina morphogenesis in camera-type eye
A0060065biological_processuterus development
A0060068biological_processvagina development
A0060157biological_processurinary bladder development
A0060347biological_processheart trabecula formation
A0070062cellular_componentextracellular exosome
B0001654biological_processeye development
B0002639biological_processpositive regulation of immunoglobulin production
B0005501molecular_functionretinoid binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0006094biological_processgluconeogenesis
B0007507biological_processheart development
B0007601biological_processvisual perception
B0016918molecular_functionretinal binding
B0019841molecular_functionretinol binding
B0030277biological_processmaintenance of gastrointestinal epithelium
B0030324biological_processlung development
B0032024biological_processpositive regulation of insulin secretion
B0032526biological_processresponse to retinoic acid
B0034632molecular_functionretinol transmembrane transporter activity
B0034633biological_processretinol transport
B0042572biological_processretinol metabolic process
B0042593biological_processglucose homeostasis
B0048562biological_processembryonic organ morphogenesis
B0048706biological_processembryonic skeletal system development
B0048738biological_processcardiac muscle tissue development
B0048807biological_processfemale genitalia morphogenesis
B0060044biological_processnegative regulation of cardiac muscle cell proliferation
B0060059biological_processembryonic retina morphogenesis in camera-type eye
B0060065biological_processuterus development
B0060068biological_processvagina development
B0060157biological_processurinary bladder development
B0060347biological_processheart trabecula formation
B0070062cellular_componentextracellular exosome
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE 2T1 A 184
ChainResidue
ALEU35
AHIS104
AARG121
ATYR133
APHE135
APHE36
ALEU37
AALA57
AMET73
AGLY75
AMET88
ATYR90
AGLN98

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE 2T1 B 184
ChainResidue
BLEU35
BPHE36
BLEU37
BALA55
BMET73
BMET88
BTYR90
BGLN98
BHIS104
BGLN117
BARG121
BPHE135

Functional Information from PROSITE/UniProt
site_idPS00213
Number of Residues14
DetailsLIPOCALIN Lipocalin signature. NFDkaRFSGTWYAM
ChainResidueDetails
AASN14-MET27

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P27485
ChainResidueDetails
AGLN98
BGLN98

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:Q00724
ChainResidueDetails
AARG121
BARG121

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PDB entries from 2024-11-06

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