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3EKV

Crystal structure of the wild type HIV-1 protease with the inhibitor, Amprenavir

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 478 A 200
ChainResidue
AASP25
BASP25
BGLY27
BALA28
BASP30
BVAL32
BGLY48
BGLY49
BILE50
BPRO81
BVAL82
AGLY27
BILE84
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
AHOH108

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT A 501
ChainResidue
ALYS7
AHOH107

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 502
ChainResidue
ALYS20
AGLU21
AASN83
AHOH530

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 503
ChainResidue
AARG14
AGLY17
BGLY16
BHOH544

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 504
ChainResidue
AGLY68
AHIS69
ALYS70
BPRO1

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVL
ChainResidueDetails
AALA22-LEU33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP25
BTHR26

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP25

246704

PDB entries from 2025-12-24

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