3D80
Structural Analysis of a Holo Enzyme Complex of Mouse Dihydrofolate Reductase with NADPH and a Ternary Complex wtih the Potent and Selective Inhibitor 2,4-Diamino-6-(2'-hydroxydibenz[b,f]azepin-5-yl)methylpteridine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0003729 | molecular_function | mRNA binding |
A | 0004146 | molecular_function | dihydrofolate reductase activity |
A | 0005634 | cellular_component | nucleus |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005829 | cellular_component | cytosol |
A | 0006729 | biological_process | tetrahydrobiopterin biosynthetic process |
A | 0006730 | biological_process | one-carbon metabolic process |
A | 0008144 | molecular_function | obsolete drug binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0031103 | biological_process | axon regeneration |
A | 0031427 | biological_process | response to methotrexate |
A | 0035094 | biological_process | response to nicotine |
A | 0035999 | biological_process | tetrahydrofolate interconversion |
A | 0046452 | biological_process | dihydrofolate metabolic process |
A | 0046653 | biological_process | tetrahydrofolate metabolic process |
A | 0046654 | biological_process | tetrahydrofolate biosynthetic process |
A | 0046655 | biological_process | folic acid metabolic process |
A | 0050661 | molecular_function | NADP binding |
A | 0051000 | biological_process | positive regulation of nitric-oxide synthase activity |
A | 0051871 | molecular_function | dihydrofolic acid binding |
A | 2000121 | biological_process | regulation of removal of superoxide radicals |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE NDP A 187 |
Chain | Residue |
A | VAL8 |
A | LYS55 |
A | THR56 |
A | LEU75 |
A | SER76 |
A | ARG77 |
A | GLU78 |
A | LYS91 |
A | SER92 |
A | VAL115 |
A | GLY117 |
A | ALA9 |
A | SER118 |
A | SER119 |
A | THR146 |
A | Q22188 |
A | HOH285 |
A | HOH302 |
A | HOH304 |
A | HOH313 |
A | HOH348 |
A | HOH388 |
A | ILE16 |
A | HOH406 |
A | HOH449 |
A | HOH458 |
A | GLY17 |
A | GLY20 |
A | ASP21 |
A | LEU22 |
A | GLY53 |
A | ARG54 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE Q22 A 188 |
Chain | Residue |
A | ILE7 |
A | VAL8 |
A | GLY20 |
A | ASP21 |
A | GLU30 |
A | PHE31 |
A | PHE34 |
A | VAL115 |
A | TYR121 |
A | THR136 |
A | NDP187 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 189 |
Chain | Residue |
A | PRO82 |
A | PRO83 |
A | ARG84 |
A | GLY85 |
A | ALA86 |
A | HOH376 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 190 |
Chain | Residue |
A | THR39 |
A | SER41 |
A | HOH330 |
A | HOH331 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 191 |
Chain | Residue |
A | LYS80 |
A | PRO82 |
A | LEU89 |
A | HOH277 |
A | HOH353 |
A | HOH544 |
Functional Information from PROSITE/UniProt
site_id | PS00075 |
Number of Residues | 24 |
Details | DHFR_1 Dihydrofolate reductase (DHFR) domain signature. GIGkngdLPWpplrnEfkyFqrmT |
Chain | Residue | Details |
A | GLY15-THR38 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 5 |
Details | BINDING: BINDING => ECO:0000269|PubMed:15681865, ECO:0000269|PubMed:17019704 |
Chain | Residue | Details |
A | ALA9 | |
A | GLY15 | |
A | ARG54 | |
A | SER76 | |
A | GLY116 |
site_id | SWS_FT_FI2 |
Number of Residues | 3 |
Details | BINDING: BINDING => ECO:0000305|PubMed:15681865 |
Chain | Residue | Details |
A | GLU30 | |
A | ASN64 | |
A | ARG70 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0007744|PubMed:23806337 |
Chain | Residue | Details |
A | LYS32 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dhf |
Chain | Residue | Details |
A | LEU22 | |
A | GLU30 |