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3C5F

Structure of a binary complex of the R517A Pol lambda mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
B0003677molecular_functionDNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0006281biological_processDNA repair
B0016779molecular_functionnucleotidyltransferase activity
B0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 800
ChainResidue
ACYS300
AILE302
AILE305
DDC3

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 801
ChainResidue
ASER339
AILE341
AALA344
PDA5

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 802
ChainResidue
BILE341
BALA344
QDA5
BSER339

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA B 803
ChainResidue
BSER497
BHIS530
BALA531

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 804
ChainResidue
ASER497
AGLU498
AHIS530
AALA531

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 805
ChainResidue
BCYS300
BILE302
BILE305
EDC3

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GSYrRGkatCgDVDVLIthP
ChainResidueDetails
AGLY416-PRO435

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Schiff-base intermediate with DNA => ECO:0000269|PubMed:11457865
ChainResidueDetails
ALYS312
BLYS312

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFP, ECO:0007744|PDB:2PFQ
ChainResidueDetails
AARG386
ASER417
AGLY426
AASN513
BARG386
BSER417
BGLY426
BASN513

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:17475573, ECO:0007744|PDB:2PFO, ECO:0007744|PDB:2PFQ
ChainResidueDetails
AASP427
AASP429
AASP490
BASP427
BASP429
BASP490

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1jms
ChainResidueDetails
AASP490

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1jms
ChainResidueDetails
BASP490

227561

PDB entries from 2024-11-20

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