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3AL6

Crystal structure of Human TYW5

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0008033biological_processtRNA processing
A0016491molecular_functionoxidoreductase activity
A0031591biological_processwybutosine biosynthetic process
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0102524molecular_functiontRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
B0000049molecular_functiontRNA binding
B0005506molecular_functioniron ion binding
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0008033biological_processtRNA processing
B0016491molecular_functionoxidoreductase activity
B0031591biological_processwybutosine biosynthetic process
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
B0051213molecular_functiondioxygenase activity
B0102524molecular_functiontRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
C0000049molecular_functiontRNA binding
C0005506molecular_functioniron ion binding
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0008033biological_processtRNA processing
C0016491molecular_functionoxidoreductase activity
C0031591biological_processwybutosine biosynthetic process
C0042803molecular_functionprotein homodimerization activity
C0046872molecular_functionmetal ion binding
C0051213molecular_functiondioxygenase activity
C0102524molecular_functiontRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
D0000049molecular_functiontRNA binding
D0005506molecular_functioniron ion binding
D0005515molecular_functionprotein binding
D0005737cellular_componentcytoplasm
D0008033biological_processtRNA processing
D0016491molecular_functionoxidoreductase activity
D0031591biological_processwybutosine biosynthetic process
D0042803molecular_functionprotein homodimerization activity
D0046872molecular_functionmetal ion binding
D0051213molecular_functiondioxygenase activity
D0102524molecular_functiontRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NI A 401
ChainResidue
AHIS160
AASP162
AHIS235

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NI B 401
ChainResidue
BHIS160
BASP162
BHIS235
BAKG501

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AKG B 501
ChainResidue
BLEU157
BHIS160
BASP162
BASN166
BLYS175
BHIS235
BVAL237
BASN247
BNI401
BTYR106
BARG149

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NI C 401
ChainResidue
CHIS160
CASP162
CHIS235

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NI D 401
ChainResidue
DHIS160
DASP162
DHIS235
DAKG501

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE AKG D 501
ChainResidue
DTYR106
DARG149
DLEU157
DHIS160
DASP162
DASN166
DLEU168
DLYS175
DHIS235
DVAL237
DASN247
DPHE249
DNI401

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues495
DetailsDomain: {"description":"JmjC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20972222","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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