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3A4U

Crystal structure of MCFD2 in complex with carbohydrate recognition domain of ERGIC-53

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0005509molecular_functioncalcium ion binding
B0005515molecular_functionprotein binding
B0005783cellular_componentendoplasmic reticulum
B0005789cellular_componentendoplasmic reticulum membrane
B0005793cellular_componentendoplasmic reticulum-Golgi intermediate compartment
B0005794cellular_componentGolgi apparatus
B0012507cellular_componentER to Golgi transport vesicle membrane
B0015031biological_processprotein transport
B0016192biological_processvesicle-mediated transport
B0033116cellular_componentendoplasmic reticulum-Golgi intermediate compartment membrane
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 286
ChainResidue
AHOH4
AHOH14
AASP152
APHE154
AASN156
AASP181

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 287
ChainResidue
AASN161
AASN162
AASP181
AHOH308
AHOH30
AASP155
AASP157

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 288
ChainResidue
ALYS53
AGLY54
APRO55
AHIS56
ALEU57
AHOH315
BTYR82
BLEU91
BHOH150

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 289
ChainResidue
AHOH11
AASP78
AGLN79
ASER85
ALYS87
AGLY252

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 290
ChainResidue
APHE101
AGLU102
ATRP104
ATYR207
AILE238
APRO239
AHOH336
AHOH366

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 147
ChainResidue
BASP81
BASP83
BASN85
BLEU87
BGLU92
BHOH159

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA B 148
ChainResidue
BASP129
BASN131
BASP133
BTYR135
BHOH152
BHOH154
BHOH163

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 222
ChainResidue
ALYS96
ATHR97
AHOH297
BGLU114
BASP115
BHOH178
BHOH189

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DYDGNNLLDglEL
ChainResidueDetails
BASP81-LEU93
BASP129-PHE141

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues9
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00448
ChainResidueDetails
BASP81
BASP83
BASN85
BGLU92
BASP129
BASN131
BASP133
BTYR135
BGLU140

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q8K5B3
ChainResidueDetails
BSER106
APHE154
AASN156
AASP181

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PDB entries from 2024-07-17

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