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2XZO

Upf1 helicase - RNA complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE 1PE B 1
ChainResidue
AASN472
AHIS473
ASER474
ATHR496
ALEU698
AGLN699
AVAL700
ATYR702

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 1PE B 2
ChainResidue
ATHR464
AALA465
AGLN466
AHOH1189
AARG462

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 1PE B 6
ChainResidue
AASP421
AARG422
ASER425
AALA426
AGLY621
AHOH1102

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ADP E 480
ChainResidue
APRO469
AASP470
AASN472
AGLN475
AGLY495
ATHR496
AGLY497
ALYS498
ATHR499
AVAL500
ATYR702
AARG703
AGLU833
AHOH1128
AALF1005
AMG1006
AHOH1119
AHOH1134

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ALF E 481
ChainResidue
APRO494
AGLY495
ALYS498
AGLU637
AGLN665
AARG703
AGLY831
AARG865
AHOH1195
AHOH1104
AADP1004
AMG1006

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 482
ChainResidue
ATHR499
AHOH1195
AHOH1106
AADP1004
AALF1005
AHOH1119

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 483
ChainResidue
ATYR806
AMET807
APHE809
ASER810
ASER812
ATHR815

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21419344","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PDB","id":"2GJK","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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