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2WD0

CRYSTAL STRUCTURE OF NONSYNDROMIC DEAFNESS (DFNB12) ASSOCIATED MUTANT D124G OF MOUSE CADHERIN-23 EC1-2

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0007156biological_processhomophilic cell-cell adhesion
A0016020cellular_componentmembrane
A0098609biological_processcell-cell adhesion
C0005509molecular_functioncalcium ion binding
C0007156biological_processhomophilic cell-cell adhesion
C0016020cellular_componentmembrane
C0098609biological_processcell-cell adhesion
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 501
ChainResidue
AASN104
AASN106
AASP136
AASP138
AGLY142
AASP187

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 502
ChainResidue
AASP105
AASP138
ACL701
AGLU22
AGLU74
AVAL103

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 504
ChainResidue
AASN4
AARG5
AASP37
AASP39
AASP41
AASP87

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 601
ChainResidue
AGLU22
AASP72
AGLU74
AASP105

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A 701
ChainResidue
AGLU22
AARG73
AGLU74
AGLY102
AVAL103
ALEU139
ACA502

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 702
ChainResidue
APHE9
AARG94

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 501
ChainResidue
CGLU22
CGLU74
CVAL103
CASP105
CASP138
CCL701

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 503
ChainResidue
CASN104
CASN106
CASP136
CASP138
CGLY142
CASP187

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 504
ChainResidue
CASN4
CARG5
CASP37
CASP39
CASP41
CASP87

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA C 601
ChainResidue
CGLU22
CASP72
CGLU74
CASP105

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CL C 701
ChainResidue
CGLU22
CARG73
CGLU74
CGLY102
CVAL103
CLEU139
CCA501
CHOH2016

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues196
DetailsDomain: {"description":"Cadherin 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00043","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

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PDB entries from 2025-12-24

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