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2QMD

Structure of BACE Bound to SCH722924

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CS7 A 1
ChainResidue
AGLY72
AGLY135
APHE169
AILE171
ATRP176
ATYR259
AILE287
AASP289
AGLY291
ATHR292
ATHR293
ALEU91
AHOH926
AASP93
AGLY95
ASER96
APRO131
ATYR132
ATHR133
AGLN134

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE CS7 B 1
ChainResidue
BGLY72
BLEU91
BASP93
BGLY95
BSER96
BPRO131
BTYR132
BTHR133
BGLN134
BGLY135
BPHE169
BILE171
BTRP176
BTYR259
BILE287
BASP289
BGLY291
BTHR292
BTHR293
BHOH866

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE TAR A 448
ChainResidue
ALYS300
AHOH584
AHOH644
AHOH923
AHOH931
BHIS106
BPHE108
BLYS168

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE TAR A 2
ChainResidue
AARG68
AASN89
AHIS110
AARG111
AASN175
AHOH569
AHOH628
AHOH643
AHOH836

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE TAR B 3
ChainResidue
BARG68
BASN89
BHIS110
BARG111
BASN175
BHOH554
BHOH619
BHOH707
BHOH713

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE90-VAL101

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues682
DetailsDomain: {"description":"Peptidase A1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01103","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues14
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"17425515","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19011241","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
ATHR292
AASP289
ASER96
AASP93

site_idCSA10
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BTHR292
BASP289
BASP93
BTHR94

site_idCSA11
Number of Residues1
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
AASP93

site_idCSA12
Number of Residues1
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BASP93

site_idCSA13
Number of Residues1
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
AASP289

site_idCSA14
Number of Residues1
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BASP289

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BTHR292
BASP289
BSER96
BASP93

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
AASP289
ASER290
AASP93
ATHR94

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BASP289
BSER290
BASP93
BTHR94

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
AASP289
ASER96
AASP93

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BASP289
BSER96
BASP93

site_idCSA7
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
AASP289
ASER96
AASP93
ATYR132

site_idCSA8
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
BASP289
BSER96
BASP93
BTYR132

site_idCSA9
Number of Residues4
DetailsAnnotated By Reference To The Literature 1am5
ChainResidueDetails
ATHR292
AASP289
AASP93
ATHR94

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PDB entries from 2025-07-30

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