2P8U
Crystal structure of human 3-hydroxy-3-methylglutaryl CoA synthase I
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004421 | molecular_function | hydroxymethylglutaryl-CoA synthase activity |
A | 0006084 | biological_process | acetyl-CoA metabolic process |
A | 0008299 | biological_process | isoprenoid biosynthetic process |
A | 0010142 | biological_process | farnesyl diphosphate biosynthetic process, mevalonate pathway |
A | 0016746 | molecular_function | acyltransferase activity |
B | 0004421 | molecular_function | hydroxymethylglutaryl-CoA synthase activity |
B | 0006084 | biological_process | acetyl-CoA metabolic process |
B | 0008299 | biological_process | isoprenoid biosynthetic process |
B | 0010142 | biological_process | farnesyl diphosphate biosynthetic process, mevalonate pathway |
B | 0016746 | molecular_function | acyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE COA A 601 |
Chain | Residue |
A | ASP43 |
A | SER221 |
A | PRO266 |
A | TYR267 |
A | LYS269 |
A | LEU270 |
A | LYS273 |
A | HOH1097 |
A | HOH1252 |
A | ALA44 |
A | GLY45 |
A | LYS46 |
A | GLY50 |
A | TYR163 |
A | ASN167 |
A | ALA168 |
A | THR171 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 981 |
Chain | Residue |
A | LYS461 |
A | ARG463 |
B | LYS461 |
B | ARG463 |
B | HOH795 |
site_id | AC3 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE COA B 601 |
Chain | Residue |
B | ALA44 |
B | GLY45 |
B | LYS46 |
B | GLY50 |
B | TYR163 |
B | ASN167 |
B | ALA168 |
B | THR171 |
B | SER221 |
B | PRO266 |
B | TYR267 |
B | LYS269 |
B | LEU270 |
B | LYS273 |
B | HOH638 |
B | HOH698 |
B | HOH774 |
B | HOH776 |
B | HOH819 |
B | HOH866 |
B | HOH895 |
B | HOH909 |
B | HOH912 |
B | HOH936 |
B | HOH966 |
Functional Information from PROSITE/UniProt
site_id | PS01226 |
Number of Residues | 16 |
Details | HMG_COA_SYNTHASE Hydroxymethylglutaryl-coenzyme A synthase active site. NtDIEGIDttNACYgG |
Chain | Residue | Details |
A | ASN117-GLY132 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU10116 |
Chain | Residue | Details |
A | GLU95 | |
A | HIS264 | |
B | GLU95 | |
B | HIS264 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Acyl-thioester intermediate |
Chain | Residue | Details |
A | SCY129 | |
B | SCY129 |
site_id | SWS_FT_FI3 |
Number of Residues | 10 |
Details | BINDING: BINDING => ECO:0000269|PubMed:20346956, ECO:0007744|PDB:2P8U |
Chain | Residue | Details |
A | ALA44 | |
B | LYS273 | |
A | ASN167 | |
A | SER221 | |
A | LYS269 | |
A | LYS273 | |
B | ALA44 | |
B | ASN167 | |
B | SER221 | |
B | LYS269 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | MOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861 |
Chain | Residue | Details |
A | LYS46 | |
A | LYS273 | |
B | LYS46 | |
B | LYS273 |