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2NYR

Crystal Structure of Human Sirtuin Homolog 5 in Complex with Suramin

Replaces:  2FZQ
Functional Information from GO Data
ChainGOidnamespacecontents
A0036054molecular_functionprotein-malonyllysine demalonylase activity
A0036055molecular_functionprotein-succinyllysine desuccinylase activity
A0070403molecular_functionNAD+ binding
B0036054molecular_functionprotein-malonyllysine demalonylase activity
B0036055molecular_functionprotein-succinyllysine desuccinylase activity
B0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues46
DetailsBINDING SITE FOR RESIDUE SVR B 401
ChainResidue
AALA59
AARG105
AASN141
AILE142
APHE223
AASN226
ALEU232
ATYR255
AMET259
AHOH573
AHOH575
APRO68
AHOH616
BPHE70
BARG71
BALA82
BALA86
BTYR102
BARG105
BGLN140
BILE142
BHIS158
ATHR69
BVAL220
BVAL221
BPHE223
BGLY224
BGLU225
BASN226
BLEU232
BVAL254
BTYR255
BMET259
APHE70
BHOH503
BHOH508
BHOH557
BHOH559
BHOH561
BHOH562
BHOH584
AARG71
AALA82
AALA86
APHE101
ATYR102

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 501
ChainResidue
ACYS166
ACYS169
ACYS207
ACYS212

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 501
ChainResidue
BCYS166
BCYS169
BCYS207
BCYS212

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00236, ECO:0000269|PubMed:22076378, ECO:0000269|PubMed:29180469
ChainResidueDetails
AHIS158
BHIS158

site_idSWS_FT_FI2
Number of Residues10
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03160, ECO:0000269|PubMed:22076378, ECO:0000269|PubMed:22767592, ECO:0000269|Ref.19
ChainResidueDetails
AGLY58
BCYS293
AGLN140
AGLY249
AASN275
ACYS293
BGLY58
BGLN140
BGLY249
BASN275

site_idSWS_FT_FI3
Number of Residues12
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03160
ChainResidueDetails
ATYR102
BCYS169
BCYS207
BCYS212
AARG105
ACYS166
ACYS169
ACYS207
ACYS212
BTYR102
BARG105
BCYS166

218853

PDB entries from 2024-04-24

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