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2FTO

Y94F mutant of thymidylate synthase bound to thymidine-5'-phosphate and 10-propargyl-5,8-dideazafolid acid

Functional Information from GO Data
ChainGOidnamespacecontents
X0000287molecular_functionmagnesium ion binding
X0003723molecular_functionRNA binding
X0004799molecular_functionthymidylate synthase activity
X0005737cellular_componentcytoplasm
X0005829cellular_componentcytosol
X0006231biological_processdTMP biosynthetic process
X0006235biological_processdTTP biosynthetic process
X0006417biological_processregulation of translation
X0008168molecular_functionmethyltransferase activity
X0009165biological_processnucleotide biosynthetic process
X0009314biological_processresponse to radiation
X0016740molecular_functiontransferase activity
X0016741molecular_functiontransferase activity, transferring one-carbon groups
X0032259biological_processmethylation
X0042803molecular_functionprotein homodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 X 267
ChainResidue
XARG49
XLYS120
XPRO256
XGLY257

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 X 268
ChainResidue
XLEU52
XASN121
XPHE244

site_idAC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE TMP X 265
ChainResidue
XARG126
XARG127
XCYS146
XHIS147
XGLN165
XARG166
XSER167
XCYS168
XASP169
XASN177
XHIS207
XTYR209
XCB3266
XHOH338
XARG21
XTRP80

site_idAC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE CB3 X 266
ChainResidue
XGLU58
XILE79
XTRP80
XTRP83
XASP169
XGLY173
XPHE176
XASN177
XTYR209
XVAL262
XALA263
XTMP265
XHOH270
XHOH272
XHOH289
XHOH329
XHOH330
XHOH343
XHOH356

Functional Information from PROSITE/UniProt
site_idPS00091
Number of Residues29
DetailsTHYMIDYLATE_SYNTHASE Thymidylate synthase active site. RriIvsaWNvgeldkma.....LaPCHaffQFyV
ChainResidueDetails
XARG126-VAL154

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"HAMAP-Rule","id":"MF_00008","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"2223754","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8973201","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9416600","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsBinding site: {"description":"in other chain","evidences":[{"source":"PubMed","id":"2223754","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8973201","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KCE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2TSC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8312270","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"1TYS","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"2223754","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8973201","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KCE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2TSC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1b02
ChainResidueDetails
XHIS207
XGLU58
XASP169
XSER167
XCYS146
XASP205

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1b02
ChainResidueDetails
XSER180
XASN177
XCYS146

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PDB entries from 2025-10-15

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