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2E25

The Crystal Structure of the T109S mutant of E. coli Dihydroorotase complexed with an inhibitor 5-fluoroorotate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004151molecular_functiondihydroorotase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0008270molecular_functionzinc ion binding
A0016787molecular_functionhydrolase activity
A0016812molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
A0019856biological_processpyrimidine nucleobase biosynthetic process
A0042803molecular_functionprotein homodimerization activity
A0044205biological_process'de novo' UMP biosynthetic process
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 400
ChainResidue
AKCX102
AHIS139
AHIS177
AZN401
AFOT410
AHOH420

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 401
ChainResidue
AASP250
AZN400
AHOH420
AHIS16
AHIS18
AKCX102

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE FOT A 410
ChainResidue
AHIS18
AARG20
AASN44
AHIS139
ACYS221
ALEU222
AALA252
AHIS254
AALA266
AGLY267
AZN400
AHOH420

Functional Information from PROSITE/UniProt
site_idPS00482
Number of Residues9
DetailsDIHYDROOROTASE_1 Dihydroorotase signature 1. DWHLHLRdG
ChainResidueDetails
AASP14-GLY22

site_idPS00483
Number of Residues12
DetailsDIHYDROOROTASE_2 Dihydroorotase signature 2. GTDsAPHarhrK
ChainResidueDetails
AGLY248-LYS259

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00219, ECO:0000305|PubMed:15610022
ChainResidueDetails
ASER251

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00219, ECO:0000269|PubMed:11401542, ECO:0000269|PubMed:15826651, ECO:0007744|PDB:1J79, ECO:0007744|PDB:1XGE
ChainResidueDetails
ALEU17
ALEU19
AGLY140
AILE178
ASER251

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00219, ECO:0000305|PubMed:11401542, ECO:0000305|PubMed:15826651, ECO:0007744|PDB:1J79, ECO:0007744|PDB:1XGE
ChainResidueDetails
ALEU45
APRO223
AALA255
AGLY267

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: via carbamate group => ECO:0000255|HAMAP-Rule:MF_00219, ECO:0000269|PubMed:11401542, ECO:0000269|PubMed:15826651, ECO:0007744|PDB:1J79, ECO:0007744|PDB:1XGE
ChainResidueDetails
ALEU103

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N6-carboxylysine => ECO:0000255|HAMAP-Rule:MF_00219, ECO:0000269|PubMed:11401542, ECO:0000269|PubMed:15826651, ECO:0007744|PDB:1J79, ECO:0007744|PDB:1XGE
ChainResidueDetails
ALEU103

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 630
ChainResidueDetails
ALEU17metal ligand
ALEU19metal ligand
ALEU103metal ligand
AGLY140metal ligand
AILE178metal ligand
ASER251metal ligand, proton acceptor, proton donor

218853

PDB entries from 2024-04-24

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