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2CMO

The structure of a mixed glur2 ligand-binding core dimer in complex with (s)-glutamate and the antagonist (s)-ns1209

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 600
ChainResidue
ALYS144
AARG148
AARG163
AHOH2091
BHIS23

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 602
ChainResidue
AHOH2092
ALEU138
ASER142
ATHR143
AM1L1112

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 601
ChainResidue
BSER140
BLYS144
BARG148
BHOH2136
BHOH2137

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 603
ChainResidue
ASER217
BMET107
BSER108

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GLU B1111
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BSER142
BTHR143
BGLU193
BMET196
BTYR220

site_idAC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE M1L A1112
ChainResidue
AGLU13
ATYR16
ATYR61
AGLY62
AALA63
APRO89
ATHR91
AARG96
ALEU138
AGLY141
ASER142
AARG172
ATHR173
ATHR174
AGLU193
ATYR220
ASO4602
AHOH2093

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues80
DetailsTRANSMEM: Helical
ChainResidueDetails
AALA134-VAL154
AASP207-GLY227
BALA134-VAL154
BASP207-GLY227

site_idSWS_FT_FI2
Number of Residues62
DetailsTOPO_DOM: Cytoplasmic
ChainResidueDetails
APHE155-VAL181
AGLU201-CYS206
BPHE155-VAL181
BGLU201-CYS206

site_idSWS_FT_FI3
Number of Residues30
DetailsINTRAMEM: Helical; Pore-forming
ChainResidueDetails
AARG182-ASN197
BARG182-ASN197

site_idSWS_FT_FI4
Number of Residues4
DetailsINTRAMEM:
ChainResidueDetails
AGLU198-ILE200
BGLU198-ILE200

site_idSWS_FT_FI5
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
BSER142
BTHR143
BGLU193
ATHR91
AARG96
ASER142
ATHR143
AGLU193
BPRO89
BTHR91
BARG96

site_idSWS_FT_FI6
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240
BARG64
BARG148
BLYS240

site_idSWS_FT_FI7
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121
BILE121

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150
BSER150

site_idSWS_FT_FI9
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184
BSER184

site_idSWS_FT_FI10
Number of Residues2
DetailsLIPID: S-palmitoyl cysteine => ECO:0000250
ChainResidueDetails
AILE200
BILE200

site_idSWS_FT_FI11
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3
BASN3

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PDB entries from 2024-07-24

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