2A1T
Structure of the human MCAD:ETF E165betaA complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001889 | biological_process | liver development |
A | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
A | 0005634 | cellular_component | nucleus |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005759 | cellular_component | mitochondrial matrix |
A | 0005978 | biological_process | glycogen biosynthetic process |
A | 0006082 | biological_process | organic acid metabolic process |
A | 0006111 | biological_process | regulation of gluconeogenesis |
A | 0006629 | biological_process | lipid metabolic process |
A | 0006631 | biological_process | fatty acid metabolic process |
A | 0006635 | biological_process | fatty acid beta-oxidation |
A | 0007507 | biological_process | heart development |
A | 0009409 | biological_process | response to cold |
A | 0009437 | biological_process | carnitine metabolic process |
A | 0009791 | biological_process | post-embryonic development |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
A | 0019254 | biological_process | carnitine metabolic process, CoA-linked |
A | 0030424 | cellular_component | axon |
A | 0031966 | cellular_component | mitochondrial membrane |
A | 0033011 | cellular_component | perinuclear theca |
A | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
A | 0042594 | biological_process | response to starvation |
A | 0042802 | molecular_function | identical protein binding |
A | 0045329 | biological_process | carnitine biosynthetic process |
A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
A | 0051791 | biological_process | medium-chain fatty acid metabolic process |
A | 0051793 | biological_process | medium-chain fatty acid catabolic process |
A | 0055007 | biological_process | cardiac muscle cell differentiation |
A | 0070991 | molecular_function | medium-chain fatty acyl-CoA dehydrogenase activity |
A | 0097228 | cellular_component | sperm principal piece |
A | 0120238 | cellular_component | sperm glycocalyx |
B | 0001889 | biological_process | liver development |
B | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
B | 0005634 | cellular_component | nucleus |
B | 0005737 | cellular_component | cytoplasm |
B | 0005739 | cellular_component | mitochondrion |
B | 0005759 | cellular_component | mitochondrial matrix |
B | 0005978 | biological_process | glycogen biosynthetic process |
B | 0006082 | biological_process | organic acid metabolic process |
B | 0006111 | biological_process | regulation of gluconeogenesis |
B | 0006629 | biological_process | lipid metabolic process |
B | 0006631 | biological_process | fatty acid metabolic process |
B | 0006635 | biological_process | fatty acid beta-oxidation |
B | 0007507 | biological_process | heart development |
B | 0009409 | biological_process | response to cold |
B | 0009437 | biological_process | carnitine metabolic process |
B | 0009791 | biological_process | post-embryonic development |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
B | 0019254 | biological_process | carnitine metabolic process, CoA-linked |
B | 0030424 | cellular_component | axon |
B | 0031966 | cellular_component | mitochondrial membrane |
B | 0033011 | cellular_component | perinuclear theca |
B | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
B | 0042594 | biological_process | response to starvation |
B | 0042802 | molecular_function | identical protein binding |
B | 0045329 | biological_process | carnitine biosynthetic process |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0051791 | biological_process | medium-chain fatty acid metabolic process |
B | 0051793 | biological_process | medium-chain fatty acid catabolic process |
B | 0055007 | biological_process | cardiac muscle cell differentiation |
B | 0070991 | molecular_function | medium-chain fatty acyl-CoA dehydrogenase activity |
B | 0097228 | cellular_component | sperm principal piece |
B | 0120238 | cellular_component | sperm glycocalyx |
C | 0001889 | biological_process | liver development |
C | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
C | 0005634 | cellular_component | nucleus |
C | 0005737 | cellular_component | cytoplasm |
C | 0005739 | cellular_component | mitochondrion |
C | 0005759 | cellular_component | mitochondrial matrix |
C | 0005978 | biological_process | glycogen biosynthetic process |
C | 0006082 | biological_process | organic acid metabolic process |
C | 0006111 | biological_process | regulation of gluconeogenesis |
C | 0006629 | biological_process | lipid metabolic process |
C | 0006631 | biological_process | fatty acid metabolic process |
C | 0006635 | biological_process | fatty acid beta-oxidation |
C | 0007507 | biological_process | heart development |
C | 0009409 | biological_process | response to cold |
C | 0009437 | biological_process | carnitine metabolic process |
C | 0009791 | biological_process | post-embryonic development |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
C | 0019254 | biological_process | carnitine metabolic process, CoA-linked |
C | 0030424 | cellular_component | axon |
C | 0031966 | cellular_component | mitochondrial membrane |
C | 0033011 | cellular_component | perinuclear theca |
C | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
C | 0042594 | biological_process | response to starvation |
C | 0042802 | molecular_function | identical protein binding |
C | 0045329 | biological_process | carnitine biosynthetic process |
C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
C | 0051791 | biological_process | medium-chain fatty acid metabolic process |
C | 0051793 | biological_process | medium-chain fatty acid catabolic process |
C | 0055007 | biological_process | cardiac muscle cell differentiation |
C | 0070991 | molecular_function | medium-chain fatty acyl-CoA dehydrogenase activity |
C | 0097228 | cellular_component | sperm principal piece |
C | 0120238 | cellular_component | sperm glycocalyx |
D | 0001889 | biological_process | liver development |
D | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
D | 0005634 | cellular_component | nucleus |
D | 0005737 | cellular_component | cytoplasm |
D | 0005739 | cellular_component | mitochondrion |
D | 0005759 | cellular_component | mitochondrial matrix |
D | 0005978 | biological_process | glycogen biosynthetic process |
D | 0006082 | biological_process | organic acid metabolic process |
D | 0006111 | biological_process | regulation of gluconeogenesis |
D | 0006629 | biological_process | lipid metabolic process |
D | 0006631 | biological_process | fatty acid metabolic process |
D | 0006635 | biological_process | fatty acid beta-oxidation |
D | 0007507 | biological_process | heart development |
D | 0009409 | biological_process | response to cold |
D | 0009437 | biological_process | carnitine metabolic process |
D | 0009791 | biological_process | post-embryonic development |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
D | 0019254 | biological_process | carnitine metabolic process, CoA-linked |
D | 0030424 | cellular_component | axon |
D | 0031966 | cellular_component | mitochondrial membrane |
D | 0033011 | cellular_component | perinuclear theca |
D | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
D | 0042594 | biological_process | response to starvation |
D | 0042802 | molecular_function | identical protein binding |
D | 0045329 | biological_process | carnitine biosynthetic process |
D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
D | 0051791 | biological_process | medium-chain fatty acid metabolic process |
D | 0051793 | biological_process | medium-chain fatty acid catabolic process |
D | 0055007 | biological_process | cardiac muscle cell differentiation |
D | 0070991 | molecular_function | medium-chain fatty acyl-CoA dehydrogenase activity |
D | 0097228 | cellular_component | sperm principal piece |
D | 0120238 | cellular_component | sperm glycocalyx |
R | 0005515 | molecular_function | protein binding |
R | 0005739 | cellular_component | mitochondrion |
R | 0005759 | cellular_component | mitochondrial matrix |
R | 0009055 | molecular_function | electron transfer activity |
R | 0009063 | biological_process | amino acid catabolic process |
R | 0016491 | molecular_function | oxidoreductase activity |
R | 0022904 | biological_process | respiratory electron transport chain |
R | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
R | 0045251 | cellular_component | electron transfer flavoprotein complex |
R | 0050660 | molecular_function | flavin adenine dinucleotide binding |
S | 0005515 | molecular_function | protein binding |
S | 0005739 | cellular_component | mitochondrion |
S | 0005759 | cellular_component | mitochondrial matrix |
S | 0009055 | molecular_function | electron transfer activity |
S | 0009063 | biological_process | amino acid catabolic process |
S | 0022904 | biological_process | respiratory electron transport chain |
S | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
S | 0045251 | cellular_component | electron transfer flavoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE AMP S 600 |
Chain | Residue |
S | ALA9 |
S | ALA126 |
S | ASP129 |
S | CYS131 |
S | ASN132 |
S | GLN133 |
S | THR134 |
S | VAL10 |
S | LYS11 |
S | ASN39 |
S | CYS42 |
S | CYS66 |
S | LEU122 |
S | GLY123 |
S | GLN125 |
site_id | AC2 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE FAD A 399 |
Chain | Residue |
A | TYR133 |
A | VAL135 |
A | THR136 |
A | GLY141 |
A | SER142 |
A | TRP166 |
A | ILE167 |
A | THR168 |
A | ILE371 |
A | ILE374 |
A | TYR375 |
A | GLU376 |
A | THR378 |
A | GLN380 |
A | LEU384 |
A | HOH412 |
B | ARG281 |
B | THR283 |
B | PHE284 |
B | LEU288 |
B | HIS291 |
B | GLN349 |
B | ILE350 |
B | GLY353 |
D | GLN292 |
site_id | AC3 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE FAD B 1399 |
Chain | Residue |
A | ARG281 |
A | THR283 |
A | PHE284 |
A | LEU288 |
A | HIS291 |
A | ILE294 |
A | GLN349 |
A | ILE350 |
A | GLY353 |
B | TYR133 |
B | VAL135 |
B | THR136 |
B | GLY141 |
B | SER142 |
B | TRP166 |
B | THR168 |
B | ILE371 |
B | TYR375 |
B | THR378 |
B | GLN380 |
C | GLN292 |
site_id | AC4 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE FAD C 2399 |
Chain | Residue |
B | GLN292 |
C | TYR133 |
C | VAL135 |
C | THR136 |
C | GLY141 |
C | SER142 |
C | TRP166 |
C | ILE167 |
C | THR168 |
C | ASN214 |
C | ILE371 |
C | ILE374 |
C | THR378 |
C | GLN380 |
D | ARG281 |
D | THR283 |
D | PHE284 |
D | LEU288 |
D | HIS291 |
D | GLN349 |
D | ILE350 |
D | GLY353 |
site_id | AC5 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE FAD D 3399 |
Chain | Residue |
D | THR168 |
D | ILE371 |
D | ILE374 |
D | TYR375 |
D | THR378 |
D | GLN380 |
D | HOH3402 |
A | GLN292 |
C | ARG281 |
C | THR283 |
C | PHE284 |
C | LEU288 |
C | HIS291 |
C | ILE294 |
C | GLN349 |
C | ILE350 |
C | GLY353 |
D | TYR133 |
D | VAL135 |
D | THR136 |
D | GLY141 |
D | SER142 |
D | TRP166 |
site_id | AC6 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE FAD R 599 |
Chain | Residue |
C | GLN163 |
C | MET165 |
D | ASN357 |
R | GLY222 |
R | ARG223 |
R | GLY224 |
R | LYS226 |
R | SER248 |
R | ARG249 |
R | ALA250 |
R | GLN262 |
R | VAL263 |
R | GLY264 |
R | GLN265 |
R | THR266 |
R | GLY267 |
R | GLY279 |
R | ILE280 |
R | SER281 |
R | ALA283 |
R | GLN285 |
R | HIS286 |
R | ASN300 |
R | LYS301 |
R | ASP302 |
R | ALA317 |
R | ASP318 |
R | LEU319 |
R | PHE320 |
R | HOH602 |
Functional Information from PROSITE/UniProt
site_id | PS00072 |
Number of Residues | 13 |
Details | ACYL_COA_DH_1 Acyl-CoA dehydrogenases signature 1. CVTEpgAGSDvaG |
Chain | Residue | Details |
A | CYS134-GLY146 |
site_id | PS00073 |
Number of Residues | 20 |
Details | ACYL_COA_DH_2 Acyl-CoA dehydrogenases signature 2. QiLGGnGFntEypveKlmrD |
Chain | Residue | Details |
A | GLN349-ASP368 |
site_id | PS00696 |
Number of Residues | 27 |
Details | ETF_ALPHA Electron transfer flavoprotein alpha-subunit signature. LYIAvGISGaIQHlaGmkdsktIvAIN |
Chain | Residue | Details |
R | LEU274-ASN300 |
site_id | PS01065 |
Number of Residues | 21 |
Details | ETF_BETA Electron transfer flavoprotein beta-subunit signature. VeRaiDGGl.EtLrlklPaVVT |
Chain | Residue | Details |
S | VAL162-THR182 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"1970566","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8823176","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 64 |
Details | Binding site: {"description":"in other chain","evidences":[{"source":"PubMed","id":"15159392","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15975918","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8823176","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"FEB-2014","submissionDatabase":"PDB data bank","title":"Medium chain acyl-CoA dehydrogenase, K304E mutant.","authors":["Battaile K.P.","Mohsen A.-W.","Vockley J."]}},{"source":"PDB","id":"1EGC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EGD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EGE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1T9G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2A1T","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4P13","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 16 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"8823176","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1EGC","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 24 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"15159392","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15975918","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8823176","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"FEB-2014","submissionDatabase":"PDB data bank","title":"Medium chain acyl-CoA dehydrogenase, K304E mutant.","authors":["Battaile K.P.","Mohsen A.-W.","Vockley J."]}},{"source":"PDB","id":"1EGC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EGD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EGE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1T9G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2A1T","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4P13","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 20 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P45952","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P45952","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 8 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 4 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P45952","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 184 |
Details | Region: {"description":"Domain I","evidences":[{"source":"PubMed","id":"8962055","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 12 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"15975918","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8962055","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1EFV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2A1T","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 7 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q99LC5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 5 |
Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q99LC5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q99LC5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI14 |
Number of Residues | 3 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI15 |
Number of Residues | 3 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q99LC5","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI16 |
Number of Residues | 22 |
Details | Region: {"description":"Recognition loop","evidences":[{"source":"PubMed","id":"15159392","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25023281","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI17 |
Number of Residues | 16 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"15159392","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15975918","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8962055","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1EFV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1T9G","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2A1T","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI18 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"24129315","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI19 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6,N6,N6-trimethyllysine; by ETFBKMT","evidences":[{"source":"PubMed","id":"25023281","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25416781","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI20 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q9DCW4","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
A | THR255 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
B | THR255 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
C | THR255 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
D | THR255 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
A | GLU376 |
site_id | CSA6 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
B | GLU376 |
site_id | CSA7 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
C | GLU376 |
site_id | CSA8 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1ivh |
Chain | Residue | Details |
D | GLU376 |