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1T05

HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 600
ChainResidue
AASP110
AVAL111
AASP185
ATNV823

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG A 601
ChainResidue
AASP443
AASP498

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE TNV A 823
ChainResidue
AVAL111
AGLY112
AASP113
AALA114
AGLN151
AASP185
ALYS219
AMG600
PDDG822
TDT705
TDC706
ALYS65
AARG72
AASP110

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 824
ChainResidue
ALYS101
ALYS103
AVAL106
ATYR188
AHIS235
APRO236
ATYR318
AHOH827

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 825
ChainResidue
AGLU328
AGLN340
ATYR342
APRO345
AGOL826
AHOH829

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 826
ChainResidue
AGLN330
AGLN340
AGOL825

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 438
ChainResidue
BASP76
BARG78
BGLU79
BLYS82
BGLU413
BGOL439

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE GOL B 439
ChainResidue
BGOL438

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues190
DetailsDomain: {"description":"Reverse transcriptase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00405","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsRegion: {"description":"RT 'primer grip'"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsMotif: {"description":"Tryptophan repeat motif"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsSite: {"description":"Essential for RT p66/p51 heterodimerization"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsSite: {"description":"Cleavage; by viral protease; partial"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues16
DetailsMotif: {"description":"Tryptophan repeat motif","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues3
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues2
DetailsSite: {"description":"Essential for RT p66/p51 heterodimerization","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

239149

PDB entries from 2025-07-23

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