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1RDT

Crystal Structure of a new rexinoid bound to the RXRalpha ligand binding doamin in the RXRalpha/PPARgamma heterodimer

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003707molecular_functionnuclear steroid receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
A0008270molecular_functionzinc ion binding
D0003677molecular_functionDNA binding
D0004879molecular_functionnuclear receptor activity
D0005634cellular_componentnucleus
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE L79 A 463
ChainResidue
AILE268
AALA327
AILE345
APHE346
AHIS435
ALEU436
AALA271
AALA272
AGLN275
AASN306
ALEU309
APHE313
AARG316
ALEU326

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 570 D 478
ChainResidue
DPHE282
DGLY284
DCYS285
DGLN286
DSER289
DHIS323
DTYR327
DLEU330
DILE341
DMET348
DPHE363
DHIS449
DLEU465
DLEU469
DTYR473

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
BSER698
DTYR473
DHIS323
DHIS449

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
DLYS224

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine; by MAPK8 and MAPK9 => ECO:0000250|UniProtKB:P28700
ChainResidueDetails
ASER260

218500

PDB entries from 2024-04-17

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