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1M6D

Crystal structure of human cathepsin F

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
B0006508biological_processproteolysis
B0008234molecular_functioncysteine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE MYP A 1280
ChainResidue
AGLN19
ASER154
APRO156
ALEU156
AILE157
AASP158
AHIS159
ATRP177
AHOH1302
AHOH1312
BTRP156
AGLY23
BPRO156
BHOH2292
ACYS25
ATRP26
AGLY65
AGLY66
ALEU67
AGLN142
ALEU152

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE MYP B 2280
ChainResidue
ASER73
AASN78
BGLN19
BGLY23
BCYS25
BTRP26
BMET64
BGLY65
BGLY66
BLEU67
BALA133
BPHE143
BILE157
BASP158
BHIS159
BTRP177
BMET205
BHOH2365
BHOH2380
BHOH2399

Functional Information from PROSITE/UniProt
site_idPS00139
Number of Residues12
DetailsTHIOL_PROTEASE_CYS Eukaryotic thiol (cysteine) proteases cysteine active site. QGmCGSCWAfSV
ChainResidueDetails
AGLN19-VAL30

site_idPS00639
Number of Residues11
DetailsTHIOL_PROTEASE_HIS Eukaryotic thiol (cysteine) proteases histidine active site. IDHAVLLVGYG
ChainResidueDetails
AILE157-GLY167

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000269|PubMed:12225749
ChainResidueDetails
ACYS25
AHIS159
BCYS25
BHIS159

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AASN175
BASN175

site_idSWS_FT_FI3
Number of Residues6
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
AGLN96
AGLN108
AGLN167
BGLN96
BGLN108
BGLN167

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
AASN175
ACYS25
AHIS159

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
BASN175
BCYS25
BHIS159

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
AGLN19
ACYS25
AHIS159

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
BGLN19
BCYS25
BHIS159

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
AASN175
AGLN19
AHIS159

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1pad
ChainResidueDetails
BASN175
BGLN19
BHIS159

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PDB entries from 2025-06-11

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