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1K7L

The 2.5 Angstrom resolution crystal structure of the human PPARalpha ligand binding domain bound with GW409544 and a co-activator peptide.

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
C0003677molecular_functionDNA binding
C0004879molecular_functionnuclear receptor activity
C0005634cellular_componentnucleus
C0006355biological_processregulation of DNA-templated transcription
E0003677molecular_functionDNA binding
E0004879molecular_functionnuclear receptor activity
E0005634cellular_componentnucleus
E0006355biological_processregulation of DNA-templated transcription
G0003677molecular_functionDNA binding
G0004879molecular_functionnuclear receptor activity
G0005634cellular_componentnucleus
G0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE YT3 C 469
ChainResidue
AGLU267
AGLU451
AASP453
CGLU267
CGLU451
CASP453

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE YT3 E 469
ChainResidue
GGLU267
GGLU451
GASP453
EGLU267
EGLU451
EASP453

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE 544 A 469
ChainResidue
APHE273
ACYS275
ACYS276
ASER280
ATYR314
ALEU321
AVAL332
APHE351
AILE354
AMET355
AHIS440
ATYR464

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 544 C 470
ChainResidue
CLEU247
CGLU269
CPHE273
CCYS275
CCYS276
CGLN277
CSER280
CTYR314
CMET330
CVAL332
CLEU347
CPHE351
CILE354
CHIS440
CVAL444
CTYR464
CHOH527

site_idAC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 544 E 501
ChainResidue
EGLU269
EPHE273
ECYS275
ECYS276
ESER280
ETYR314
EMET330
EVAL332
EPHE351
EILE354
EMET355
EHIS440
ELEU460
ETYR464

site_idAC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE 544 G 601
ChainResidue
GLEU247
GILE272
GPHE273
GCYS275
GCYS276
GTHR279
GSER280
GTYR314
GLEU321
GMET330
GVAL332
GLEU347
GPHE351
GILE354
GMET355
GHIS440
GLEU460
GTYR464

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
BSER698
GSER280
GTYR314
GTYR464
DSER698
FSER698
HSER698
CTYR314
CTYR464
ESER280
ETYR314
ETYR464

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Essential for heterodimerization with RXRA
ChainResidueDetails
ALEU433
CLEU433
ELEU433
GLEU433

224004

PDB entries from 2024-08-21

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