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1K54

OXA-10 class D beta-lactamase partially acylated with reacted 6beta-(1-hydroxy-1-methylethyl) penicillanic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
B0005886cellular_componentplasma membrane
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
C0005886cellular_componentplasma membrane
C0008658molecular_functionpenicillin binding
C0008800molecular_functionbeta-lactamase activity
C0016787molecular_functionhydrolase activity
C0017001biological_processantibiotic catabolic process
C0042597cellular_componentperiplasmic space
C0046677biological_processresponse to antibiotic
C0071555biological_processcell wall organization
D0005886cellular_componentplasma membrane
D0008658molecular_functionpenicillin binding
D0008800molecular_functionbeta-lactamase activity
D0016787molecular_functionhydrolase activity
D0017001biological_processantibiotic catabolic process
D0042597cellular_componentperiplasmic space
D0046677biological_processresponse to antibiotic
D0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 C 901
ChainResidue
BLYS95
CSER67
CTHR206
CGLY207
CPHE208
CARG250
CSO4902
CHOH926

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 C 902
ChainResidue
CLYS70
CSER115
CALA116
CVAL117
CSO4901
CHOH926
CSER67

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 903
ChainResidue
ATHR206
AARG250
ALYS251
ASO4905
AHOH1018

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 904
ChainResidue
CLYS61
CHOH936

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 905
ChainResidue
ASER67
ASER115
ALYS205
ATHR206
AGLY207
APHE208
AARG250
ASO4903
AHOQ967

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 906
ChainResidue
AMET99
ALYS100
AGLN101

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 907
ChainResidue
BLYS152
CTHR213
CASN216
CHOH965

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 B 908
ChainResidue
BSER67
BSER115
BLYS205
BTHR206
BGLY207
BPHE208
BARG250
BSO4909
BHOQ967
BHOH1082

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 909
ChainResidue
BTHR206
BARG250
BLYS251
BSO4908
BHOH1082
BHOH1233

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 910
ChainResidue
DARG250
DLYS251
DHOH1091
DHOH1125
DHOH1242

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 D 911
ChainResidue
DSER67
DLYS70
DSER115
DALA116
DVAL117
DHOH1118
DHOH1197

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 912
ChainResidue
BMET99
BLYS100
BGLN101
BHOH1232

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 913
ChainResidue
BTHR80
BARG131
BLYS134
BTYR135
BHOH1118

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 914
ChainResidue
AARG131
ALYS134
ATYR135

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 915
ChainResidue
BARG160

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 916
ChainResidue
BHOH1192
DSER181
DLYS182
DHOH1065

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 917
ChainResidue
ALYS95
DTHR206
DGLY207
DPHE208
DARG250
DHOH1152

site_idBC9
Number of Residues12
DetailsBINDING SITE FOR RESIDUE HOQ A 967
ChainResidue
AHOH1131
AHOH1140
AALA66
ASER67
AKCX70
AMET99
ATRP102
AVAL117
ALEU155
AGLY207
APHE208
ASO4905

site_idCC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE HOQ B 967
ChainResidue
BALA66
BSER67
BKCX70
BMET99
BTRP102
BVAL117
BGLY207
BPHE208
BSO4908
BHOH1120

site_idCC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1001
ChainResidue
ATHR107
AARG109
AHOH1004
AHOH1052
AHOH1110
CGLU199
CGLU227
CGLU229

site_idCC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1002
ChainResidue
AGLU199
AGLU227
AGLU229
AHOH1057
AHOH1113
CTHR107
CARG109

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 1003
ChainResidue
BGLU199
BGLU229
BHOH1020
BHOH1078
DTHR107

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 1004
ChainResidue
BASN38
BASP240
BASP242
BHOH1015
BHOH1022
BHOH1129

site_idCC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO D 1005
ChainResidue
BTHR107
DGLU199
DGLU229
DHOH1009

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnAI
ChainResidueDetails
APRO65-ILE75
CPRO65-ILE75

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000269|PubMed:11724923, ECO:0000269|PubMed:19860471, ECO:0007744|PDB:1K54, ECO:0007744|PDB:2WGI
ChainResidueDetails
CSER67
DSER67

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:19860471, ECO:0007744|PDB:2WGI
ChainResidueDetails
CSER115
CTHR206
CPHE208
CARG250
DSER115
DTHR206
DPHE208
DARG250

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-carboxylysine => ECO:0000269|PubMed:11188693, ECO:0000269|PubMed:11724923, ECO:0000269|PubMed:19860471, ECO:0007744|PDB:1E4D, ECO:0007744|PDB:1K4E, ECO:0007744|PDB:1K4F, ECO:0007744|PDB:1K54, ECO:0007744|PDB:1K55, ECO:0007744|PDB:1K56, ECO:0007744|PDB:1K57, ECO:0007744|PDB:1K6S, ECO:0007744|PDB:2RL3
ChainResidueDetails
CLYS70
DLYS70

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
ASER67

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
BSER67

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
CSER67

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
DSER67

237735

PDB entries from 2025-06-18

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