1HNZ

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B

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Functional Information from GO Data

ChainGOidnamespacecontents
J0005840cellular_componentribosome
J0019843molecular_functionrRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0000049molecular_functiontRNA binding
J0006412biological_processtranslation
K0005840cellular_componentribosome
K0019843molecular_functionrRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0006412biological_processtranslation
L0015935cellular_componentsmall ribosomal subunit
L0019843molecular_functionrRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0000049molecular_functiontRNA binding
L0006412biological_processtranslation
M0005840cellular_componentribosome
M0019843molecular_functionrRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0000049molecular_functiontRNA binding
M0006412biological_processtranslation
N0005840cellular_componentribosome
N0019843molecular_functionrRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0008270molecular_functionzinc ion binding
N0006412biological_processtranslation
O0005840cellular_componentribosome
O0019843molecular_functionrRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0006412biological_processtranslation
P0005840cellular_componentribosome
P0003735molecular_functionstructural constituent of ribosome
P0006412biological_processtranslation
Q0005840cellular_componentribosome
Q0019843molecular_functionrRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0006412biological_processtranslation
R0005840cellular_componentribosome
R0019843molecular_functionrRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0006412biological_processtranslation
S0015935cellular_componentsmall ribosomal subunit
S0019843molecular_functionrRNA binding
S0003735molecular_functionstructural constituent of ribosome
S0006412biological_processtranslation
T0005840cellular_componentribosome
T0019843molecular_functionrRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0006412biological_processtranslation
B0015935cellular_componentsmall ribosomal subunit
B0019843molecular_functionrRNA binding
B0003735molecular_functionstructural constituent of ribosome
B0006412biological_processtranslation
C0015935cellular_componentsmall ribosomal subunit
C0003729molecular_functionmRNA binding
C0019843molecular_functionrRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0006412biological_processtranslation
D0015935cellular_componentsmall ribosomal subunit
D0046872molecular_functionmetal ion binding
D0019843molecular_functionrRNA binding
D0003735molecular_functionstructural constituent of ribosome
D0006412biological_processtranslation
E0015935cellular_componentsmall ribosomal subunit
E0019843molecular_functionrRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0006412biological_processtranslation
F0005840cellular_componentribosome
F0019843molecular_functionrRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0006412biological_processtranslation
G0015935cellular_componentsmall ribosomal subunit
G0019843molecular_functionrRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0000049molecular_functiontRNA binding
G0006412biological_processtranslation
H0005840cellular_componentribosome
H0019843molecular_functionrRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0006412biological_processtranslation
I0005840cellular_componentribosome
I0019843molecular_functionrRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0000049molecular_functiontRNA binding
I0006412biological_processtranslation
V0005840cellular_componentribosome
V0019843molecular_functionrRNA binding
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
AC12BINDING SITE FOR RESIDUE MG A 1545
ChainResidue
AC519
AA520

AC22BINDING SITE FOR RESIDUE MG A 1546
ChainResidue
AG944
AG945

AC31BINDING SITE FOR RESIDUE MG A 1547
ChainResidue
AG1224

AC45BINDING SITE FOR RESIDUE MG A 1548
ChainResidue
AG11
AU12
AG21
AG22
AC23

AC53BINDING SITE FOR RESIDUE MG A 1549
ChainResidue
AG664
AG741
AG742

AC62BINDING SITE FOR RESIDUE MG A 1550
ChainResidue
AU14
AU17

AC71BINDING SITE FOR RESIDUE MG A 1551
ChainResidue
AG377

AC82BINDING SITE FOR RESIDUE MG A 1552
ChainResidue
AC749
AG750

AC93BINDING SITE FOR RESIDUE MG A 1553
ChainResidue
AA766
AC811
AC812

BC11BINDING SITE FOR RESIDUE MG A 1554
ChainResidue
AA768

BC22BINDING SITE FOR RESIDUE MG A 1556
ChainResidue
AA780
AG800

BC32BINDING SITE FOR RESIDUE MG A 1557
ChainResidue
AG576
AC578

BC43BINDING SITE FOR RESIDUE MG A 1559
ChainResidue
AC508
AA509
AA510

BC53BINDING SITE FOR RESIDUE MG A 1560
ChainResidue
AU560
AC562
AG566

BC61BINDING SITE FOR RESIDUE MG A 1562
ChainResidue
AG21

BC74BINDING SITE FOR RESIDUE MG A 1563
ChainResidue
AG595
AC596
AG597
AU598

BC83BINDING SITE FOR RESIDUE MG A 1564
ChainResidue
AG858
AC868
AG869

BC91BINDING SITE FOR RESIDUE MG A 71
ChainResidue
AA860

CC14BINDING SITE FOR RESIDUE MG A 1566
ChainResidue
AG885
AG886
AG887
AU911

CC21BINDING SITE FOR RESIDUE MG A 1567
ChainResidue
AA937

CC32BINDING SITE FOR RESIDUE MG A 1568
ChainResidue
AC934
AU1345

CC43BINDING SITE FOR RESIDUE MG A 1569
ChainResidue
AC934
AC1344
AU1345

CC51BINDING SITE FOR RESIDUE MG A 1570
ChainResidue
AG1343

CC61BINDING SITE FOR RESIDUE MG A 1571
ChainResidue
AG1370

CC72BINDING SITE FOR RESIDUE MG A 86
ChainResidue
AG588
AG644

CC82BINDING SITE FOR RESIDUE MG A 1574
ChainResidue
AA964
AU1199

CC95BINDING SITE FOR RESIDUE MG A 1575
ChainResidue
AC979
AC980
AU981
AU982
AG1222

DC11BINDING SITE FOR RESIDUE MG A 1576
ChainResidue
AA1360

DC23BINDING SITE FOR RESIDUE MG A 1577
ChainResidue
AG1053
AC1054
AG1197

DC34BINDING SITE FOR RESIDUE MG A 1578
ChainResidue
AC1054
AU1196
AG1197
AG1198

DC42BINDING SITE FOR RESIDUE MG A 1579
ChainResidue
AG299
AG558

DC51BINDING SITE FOR RESIDUE MG A 1580
ChainResidue
AG324

DC65BINDING SITE FOR RESIDUE MG A 1581
ChainResidue
AA1396
AC1397
AA1398
AG1401
AC1402

DC74BINDING SITE FOR RESIDUE MG A 1582
ChainResidue
AC1397
AA1398
AG1401
AC1402

DC84BINDING SITE FOR RESIDUE MG A 1583
ChainResidue
AU516
AG517
AA532
AA533

DC93BINDING SITE FOR RESIDUE MG A 1584
ChainResidue
AA572
AA573
AA574

EC11BINDING SITE FOR RESIDUE MG A 1585
ChainResidue
AG898

EC21BINDING SITE FOR RESIDUE MG A 1586
ChainResidue
AA1110

EC33BINDING SITE FOR RESIDUE MG A 1587
ChainResidue
AA865
AC866
AG1079

EC44BINDING SITE FOR RESIDUE MG A 1588
ChainResidue
AA1067
AG1068
AG1094
AG1387

EC52BINDING SITE FOR RESIDUE MG A 1589
ChainResidue
AU1095
AG1108

EC62BINDING SITE FOR RESIDUE MG A 1590
ChainResidue
AG286
AU287

EC76BINDING SITE FOR RESIDUE MG A 1592
ChainResidue
AU1510
AG1511
AU1512
AU1522
AG1523
AC1524

EC85BINDING SITE FOR RESIDUE MG A 1593
ChainResidue
AA1499
AA1500
AG1508
AG1521
AMG1595

EC94BINDING SITE FOR RESIDUE MG A 1594
ChainResidue
AA1499
AA1500
AG1504
AG1505

FC16BINDING SITE FOR RESIDUE MG A 1595
ChainResidue
AA1500
AG1504
AG1505
AA1507
AG1508
AMG1593

FC21BINDING SITE FOR RESIDUE MG A 1596
ChainResidue
AC150

FC31BINDING SITE FOR RESIDUE MG A 1597
ChainResidue
AA195

FC42BINDING SITE FOR RESIDUE MG A 1598
ChainResidue
AU182
AG183

FC53BINDING SITE FOR RESIDUE MG A 1599
ChainResidue
AA116
AG117
AG289

FC62BINDING SITE FOR RESIDUE MG A 1600
ChainResidue
AC330
AC352

FC74BINDING SITE FOR RESIDUE MG A 1601
ChainResidue
AC372
AU375
AG376
AU387

FC82BINDING SITE FOR RESIDUE MG A 1603
ChainResidue
AA782
AA794

FC95BINDING SITE FOR RESIDUE MG A 1604
ChainResidue
AG1053
AG1058
AC1059
AG1198
AU1199

GC14BINDING SITE FOR RESIDUE MG A 1605
ChainResidue
AC1303
AG1304
AG1305
VASP5

GC24BINDING SITE FOR RESIDUE MG A 1606
ChainResidue
AA563
AC564
AU565
AG567

GC33BINDING SITE FOR RESIDUE MG A 210
ChainResidue
AU603
AG604
AU605

GC43BINDING SITE FOR RESIDUE MG A 211
ChainResidue
AG584
AG585
AC756

GC52BINDING SITE FOR RESIDUE MG A 214
ChainResidue
AA547
AG548

GC65BINDING SITE FOR RESIDUE MG D 215
ChainResidue
DALA82
DSER83
DLYS85
DGLY87
DTHR89

GC72BINDING SITE FOR RESIDUE MG A 1608
ChainResidue
AG410
AA431

GC82BINDING SITE FOR RESIDUE MG A 1609
ChainResidue
AA535
AC536

GC92BINDING SITE FOR RESIDUE MG A 1610
ChainResidue
AC504
AG505

HC13BINDING SITE FOR RESIDUE MG A 1611
ChainResidue
AC518
AG529
LASN49

HC22BINDING SITE FOR RESIDUE MG A 1612
ChainResidue
AC280
QSER39

HC35BINDING SITE FOR RESIDUE MG A 1613
ChainResidue
AG251
AU252
AG266
AC267
AC268

HC42BINDING SITE FOR RESIDUE MG A 1614
ChainResidue
AG238
AU239

HC51BINDING SITE FOR RESIDUE MG A 1615
ChainResidue
AG281

HC62BINDING SITE FOR RESIDUE MG A 1616
ChainResidue
AC174
AC175

HC73BINDING SITE FOR RESIDUE MG A 1617
ChainResidue
AA109
AA329
AG331

HC82BINDING SITE FOR RESIDUE MG A 1618
ChainResidue
AA300
AC564

HC94BINDING SITE FOR RESIDUE MG A 1619
ChainResidue
AG69
AG70
AG97
AU98

IC15BINDING SITE FOR RESIDUE MG A 1620
ChainResidue
AG61
AU62
AG104
AG105
AC106

IC24BINDING SITE FOR RESIDUE MG A 1621
ChainResidue
AC106
AG107
AA134
AMG1626

IC34BINDING SITE FOR RESIDUE MG A 1622
ChainResidue
AG324
AA325
AG326
TSER70

IC42BINDING SITE FOR RESIDUE MG A 1623
ChainResidue
AA134
AC135

IC52BINDING SITE FOR RESIDUE MG A 1624
ChainResidue
AA134
AA325

IC63BINDING SITE FOR RESIDUE MG A 1625
ChainResidue
AG107
AG108
AG326

IC76BINDING SITE FOR RESIDUE MG A 1626
ChainResidue
AG107
AG324
AA325
AG326
AMG1621
AMG1629

IC85BINDING SITE FOR RESIDUE MG A 1627
ChainResidue
AA109
AG324
AG326
AMG1630
AMG1631

IC92BINDING SITE FOR RESIDUE MG A 1628
ChainResidue
AG107
AG108

JC15BINDING SITE FOR RESIDUE MG A 1629
ChainResidue
AG108
AA109
AG324
AG326
AMG1626

JC26BINDING SITE FOR RESIDUE MG A 1630
ChainResidue
AA109
AG324
AG326
AA327
AMG1627
AMG1631

JC35BINDING SITE FOR RESIDUE MG A 1631
ChainResidue
AG324
AG326
AA327
AMG1627
AMG1630

JC44BINDING SITE FOR RESIDUE ZN N 190
ChainResidue
NCYS24
NCYS27
NCYS40
NCYS43

JC55BINDING SITE FOR RESIDUE ZN D 300
ChainResidue
DCYS9
DCYS12
DLEU19
DCYS26
DCYS31

JC610BINDING SITE FOR RESIDUE HYG A 1632
ChainResidue
AC1403
AC1404
AG1405
AG1494
AU1495
AC1496
AG1497
AU1498
XC5
XU6

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
HYG_1hnz_A_163212HYGROMYCIN B binding site
ChainResidueligand
AC1403-U1406HYG: HYGROMYCIN B
AA1493-U1498HYG: HYGROMYCIN B
XC5-U6HYG: HYGROMYCIN B

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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
SWS_FT_FI14Zinc (Probable)
ChainResidueDetails
DCYS9
DCYS12
DCYS26
DCYS31

SWS_FT_FI24Zinc (By similarity)
ChainResidueDetails
NCYS24
NCYS27
NCYS40
NCYS43

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Catalytic Information from CSA

site_idNumber of ResiduesDetails