Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0003746 | molecular_function | translation elongation factor activity |
A | 0003924 | molecular_function | GTPase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005525 | molecular_function | GTP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005886 | cellular_component | plasma membrane |
A | 0006412 | biological_process | translation |
A | 0006414 | biological_process | translational elongation |
A | 0032045 | cellular_component | guanyl-nucleotide exchange factor complex |
A | 0046677 | biological_process | response to antibiotic |
A | 0097216 | molecular_function | guanosine tetraphosphate binding |
B | 0003723 | molecular_function | RNA binding |
B | 0003746 | molecular_function | translation elongation factor activity |
B | 0003924 | molecular_function | GTPase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005525 | molecular_function | GTP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005886 | cellular_component | plasma membrane |
B | 0006412 | biological_process | translation |
B | 0006414 | biological_process | translational elongation |
B | 0032045 | cellular_component | guanyl-nucleotide exchange factor complex |
B | 0046677 | biological_process | response to antibiotic |
B | 0097216 | molecular_function | guanosine tetraphosphate binding |
C | 0005576 | cellular_component | extracellular region |
C | 0031640 | biological_process | killing of cells of another organism |
C | 0042742 | biological_process | defense response to bacterium |
D | 0005576 | cellular_component | extracellular region |
D | 0031640 | biological_process | killing of cells of another organism |
D | 0042742 | biological_process | defense response to bacterium |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 998 |
Chain | Residue |
A | THR25 |
A | GDP999 |
A | HOH2018 |
A | HOH2063 |
A | HOH2064 |
A | HOH2218 |
site_id | AC2 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE GDP A 999 |
Chain | Residue |
A | LYS24 |
A | THR25 |
A | THR26 |
A | PHE46 |
A | ASN135 |
A | LYS136 |
A | ASP138 |
A | MET139 |
A | SER173 |
A | ALA174 |
A | LEU175 |
A | MG998 |
A | HOH2017 |
A | HOH2063 |
A | HOH2064 |
A | HOH2217 |
A | HOH2218 |
A | HOH2219 |
A | ASP21 |
A | HIS22 |
A | GLY23 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT A 3002 |
Chain | Residue |
A | THR167 |
A | PRO168 |
A | ILE169 |
A | HOH2115 |
A | ACT3019 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 3003 |
Chain | Residue |
A | ARG123 |
A | ASP370 |
A | ALA389 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3004 |
Chain | Residue |
A | ARG154 |
A | ASP165 |
A | SER221 |
A | ACT3028 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3005 |
Chain | Residue |
A | GLU152 |
A | GLU155 |
A | GLN159 |
A | HOH2221 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3006 |
Chain | Residue |
A | THR302 |
A | LEU362 |
A | ILE363 |
A | HOH2172 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3007 |
Chain | Residue |
A | VAL127 |
A | ARG373 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3010 |
Chain | Residue |
A | PRO113 |
A | HOH2221 |
A | HOH2222 |
B | ACT3009 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3013 |
Chain | Residue |
A | ARG171 |
A | TRP184 |
A | HOH2223 |
A | ACT3023 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3016 |
Chain | Residue |
A | ILE247 |
A | GLU287 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3017 |
Chain | Residue |
A | VAL391 |
A | LEU392 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT A 3019 |
Chain | Residue |
A | ILE169 |
A | VAL170 |
A | ARG171 |
A | LYS187 |
A | GLU190 |
A | ACT3002 |
site_id | BC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 3020 |
Chain | Residue |
A | GLU6 |
A | GLY94 |
A | ALA95 |
site_id | BC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 3021 |
Chain | Residue |
A | ASP50 |
A | PRO82 |
A | HOH2017 |
site_id | BC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3022 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE ACT A 3023 |
Chain | Residue |
A | VAL140 |
A | ASP141 |
A | ASP142 |
A | GLU143 |
A | LEU146 |
A | ACT3013 |
C | BB92 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3025 |
Chain | Residue |
A | TYR129 |
A | TYR198 |
A | HOH2226 |
A | HOH2227 |
site_id | CC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3026 |
Chain | Residue |
A | HIS84 |
A | ASN355 |
site_id | CC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 3028 |
Chain | Residue |
A | ILE220 |
A | SER221 |
A | ACT3004 |
site_id | CC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 3030 |
Chain | Residue |
A | TYR39 |
A | LEU189 |
A | ALA192 |
A | ASP196 |
site_id | CC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG B 998 |
Chain | Residue |
B | HOH2013 |
B | HOH2140 |
B | HOH2141 |
B | THR25 |
B | ASP50 |
B | GDP999 |
B | HOH2006 |
site_id | CC5 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE GDP B 999 |
Chain | Residue |
B | ASP21 |
B | HIS22 |
B | GLY23 |
B | LYS24 |
B | THR25 |
B | THR26 |
B | PHE46 |
B | ASN135 |
B | LYS136 |
B | ASP138 |
B | MET139 |
B | SER173 |
B | ALA174 |
B | LEU175 |
B | MG998 |
B | HOH2004 |
B | HOH2139 |
B | HOH2140 |
B | HOH2141 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT B 3001 |
Chain | Residue |
B | ARG154 |
B | ILE169 |
B | ACT3008 |
site_id | CC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 3008 |
Chain | Residue |
B | VAL170 |
B | ARG171 |
B | LYS187 |
B | GLU190 |
B | ACT3001 |
site_id | CC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT B 3009 |
Chain | Residue |
A | PRO111 |
A | ACT3010 |
B | ARG318 |
B | HIS319 |
B | THR320 |
B | GLU378 |
site_id | CC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 3011 |
Chain | Residue |
A | PHE323 |
A | GLU348 |
B | VAL140 |
B | ASP141 |
B | ASP142 |
site_id | DC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 3012 |
Chain | Residue |
B | GLU215 |
B | ARG288 |
B | TYR331 |
B | ARG333 |
B | HOH2087 |
site_id | DC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT B 3014 |
Chain | Residue |
B | HIS84 |
B | GLY353 |
B | ASN355 |
site_id | DC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 3015 |
Chain | Residue |
B | GLY41 |
B | ALA42 |
B | GLU68 |
B | ASP70 |
B | HOH2008 |
site_id | DC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT B 3018 |
site_id | DC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT B 3024 |
Chain | Residue |
B | GLU201 |
B | HOH2144 |
site_id | DC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT B 3027 |
site_id | DC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ACT B 3029 |
Chain | Residue |
B | TYR39 |
B | LEU189 |
B | ASP196 |
B | HOH2145 |
B | HOH2146 |
site_id | DC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NH2 C 15 |
Chain | Residue |
A | GLY222 |
C | PRO14 |
site_id | DC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NH2 D 15 |
Chain | Residue |
B | GLY222 |
D | SER13 |
D | PRO14 |
site_id | EC1 |
Number of Residues | 27 |
Details | BINDING SITE FOR CHAIN C OF THIOCILIN GE2270 |
Chain | Residue |
A | THR73 |
A | GLU143 |
A | ALA182 |
A | GLU215 |
A | ASP216 |
A | GLY222 |
A | ARG223 |
A | VAL226 |
A | THR228 |
A | GLY229 |
A | ARG230 |
A | THR256 |
A | GLY257 |
A | VAL258 |
A | GLU259 |
A | PHE261 |
A | ARG262 |
A | ASN273 |
A | VAL274 |
A | GLY275 |
A | LEU277 |
A | HOH2024 |
A | HOH2161 |
A | ACT3023 |
C | NH215 |
C | HOH2002 |
C | HOH2003 |
site_id | EC2 |
Number of Residues | 25 |
Details | BINDING SITE FOR CHAIN D OF THIOCILIN GE2270 |
Chain | Residue |
B | PRO72 |
B | THR73 |
B | GLU143 |
B | GLU215 |
B | ASP216 |
B | PHE218 |
B | ARG223 |
B | VAL226 |
B | THR228 |
B | ARG230 |
B | THR256 |
B | GLY257 |
B | VAL258 |
B | GLU259 |
B | PHE261 |
B | ARG262 |
B | LEU264 |
B | ASN273 |
B | VAL274 |
B | GLY275 |
B | LEU277 |
B | HOH2097 |
B | HOH2099 |
D | NH215 |
D | HOH2001 |
Functional Information from PROSITE/UniProt
site_id | PS00301 |
Number of Residues | 16 |
Details | G_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DNapeEKaRGITIntS |
Chain | Residue | Details |
A | ASP50-SER65 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
C | MEN3 | |
D | MEN3 | |
A | LYS136 | |
B | HIS19 | |
B | CYS81 | |
B | LYS136 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | MOD_RES: 3-hydroxyphenylalanine => ECO:0000250 |
Chain | Residue | Details |
C | BB88 | |
D | BB88 | |
Chain | Residue | Details |
C | PRO14 | |
B | PRO295 | |
D | PRO14 | |
A | GLU249 | |
A | SER253 | |
A | PRO295 | |
B | THR38 | |
B | ALA177 | |
B | GLU249 | |
B | SER253 | |
site_id | SWS_FT_FI4 |
Number of Residues | 6 |
Details | CROSSLNK: Thiazole-4-carboxylic acid (Ser-Cys) |
Chain | Residue | Details |
C | SER1 | |
C | MH611 | |
C | BB92 | |
D | SER1 | |
D | MH611 | |
D | BB92 | |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | CROSSLNK: Thiazole-4-carboxylic acid (Cys-Cys) |
Chain | Residue | Details |
C | BB910 | |
C | BB99 | |
D | BB910 | |
D | BB99 | |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | CROSSLNK: 5-methylthiazole-4-carboxylic acid (Asn-Cys) |
Chain | Residue | Details |
C | MEN3 | |
C | BB64 | |
D | MEN3 | |
D | BB64 | |
site_id | SWS_FT_FI7 |
Number of Residues | 4 |
Details | CROSSLNK: 5-(methoxymethyl)thiazole-4-carboxylic acid (Val-Cys) |
Chain | Residue | Details |
C | VAL5 | |
C | BB76 | |
D | VAL5 | |
D | BB76 | |
site_id | SWS_FT_FI8 |
Number of Residues | 2 |
Details | CROSSLNK: Thiazole-4-carboxylic acid (Phe-Cys) |
Chain | Residue | Details |
C | BB88 | |
D | BB88 | |
site_id | SWS_FT_FI9 |
Number of Residues | 4 |
Details | CROSSLNK: Oxazoline-4-carboxylic acid (Cys-Ser) |
Chain | Residue | Details |
C | BB912 | |
C | SER13 | |
D | BB912 | |
D | SER13 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | a catalytic site defined by CSA, PubMed 20434456 |
Chain | Residue | Details |
A | ASP21 | |
site_id | CSA2 |
Number of Residues | 1 |
Details | a catalytic site defined by CSA, PubMed 20434456 |
Chain | Residue | Details |
B | ASP21 | |
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 535 |
Chain | Residue | Details |
A | HIS22 | electrostatic stabiliser |
A | THR25 | electrostatic stabiliser |
A | THR26 | metal ligand |
A | ALA85 | electrostatic stabiliser |
site_id | MCSA2 |
Number of Residues | 4 |
Details | M-CSA 535 |
Chain | Residue | Details |
B | HIS22 | electrostatic stabiliser |
B | THR25 | electrostatic stabiliser |
B | THR26 | metal ligand |
B | ALA85 | electrostatic stabiliser |