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9PYF

uPA Inhibitory Fab AB2 Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.1158
Spacegroup nameP 43
Unit cell lengths86.745, 86.745, 172.420
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution86.745 - 2.900
R-factor0.2313
Rwork0.228
R-free0.29980
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.394
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]86.7453.004
High resolution limit [Å]2.9002.900
Number of reflections282022814
<I/σ(I)>10.81
Completeness [%]93.694.31
Redundancy73.134.3
CC(1/2)0.9980.833
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION298.15For crystallization purposes, uPA was co-incubated with AB2 in a 1:1 stoichiometric ratio for 1h and co-purified using size-exclusion chromatography. The complex co-eluted was concentrated to 15 mg/mL.Crystallization drops were produced by mixing 0.1 uL of uPA-AB2 solution with 0.1 uL of the respective crystallization solution. A single crystal was produced using a solution containing 0.2 M diammonium hydrogen citrate (Salt) and 20 percent PEG 3350 and incubating the experiment for 14 days at room temperature.

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