9OP3
Structure of Human ADAR2-R2D complexed with dsRNA containing 8-azaN and 2'-Deoxy-2'-fluorouridine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-08-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97946 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 170.000, 63.210, 142.200 |
Unit cell angles | 90.00, 118.13, 90.00 |
Refinement procedure
Resolution | 65.700 - 2.590 |
R-factor | 0.1799 |
Rwork | 0.178 |
R-free | 0.21980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.158 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.000 | 2.720 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.081 | 0.719 |
Number of reflections | 31299 | 1565 |
<I/σ(I)> | 7.8 | 1.1 |
Completeness [%] | 93.5 | 70 |
Redundancy | 3.6 | |
CC(1/2) | 0.997 | 0.564 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 294 | Reservoir Buffer: 250 mM NaCl, 5 mM MOPS, 20% PEG 4K |