9C50
Replacement of a single residue changes the primary specificity of thrombin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2024-05-14 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 131.150, 76.732, 89.588 |
| Unit cell angles | 90.00, 113.77, 90.00 |
Refinement procedure
| Resolution | 30.850 - 2.500 |
| R-factor | 0.1929 |
| Rwork | 0.190 |
| R-free | 0.24540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.183 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.530 |
| High resolution limit [Å] | 2.490 | 6.750 | 2.490 |
| Rmerge | 0.101 | 0.026 | 0.677 |
| Rmeas | 0.122 | 0.032 | 0.822 |
| Rpim | 0.068 | 0.018 | 0.462 |
| Total number of observations | 75189 | ||
| Number of reflections | 27672 | 1405 | 1366 |
| <I/σ(I)> | 6.8 | ||
| Completeness [%] | 96.4 | 94 | 95.6 |
| Redundancy | 2.7 | 2.7 | 2.7 |
| CC(1/2) | 0.997 | 0.998 | 0.713 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 0.1 M succinic acid, 15% PEG3350 |






