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9C50

Replacement of a single residue changes the primary specificity of thrombin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2024-05-14
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths131.150, 76.732, 89.588
Unit cell angles90.00, 113.77, 90.00
Refinement procedure
Resolution30.850 - 2.500
R-factor0.1929
Rwork0.190
R-free0.24540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.183
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.21rc1_5127)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.530
High resolution limit [Å]2.4906.7502.490
Rmerge0.1010.0260.677
Rmeas0.1220.0320.822
Rpim0.0680.0180.462
Total number of observations75189
Number of reflections2767214051366
<I/σ(I)>6.8
Completeness [%]96.49495.6
Redundancy2.72.72.7
CC(1/2)0.9970.9980.713
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293.150.1 M succinic acid, 15% PEG3350

239803

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