9C50
Replacement of a single residue changes the primary specificity of thrombin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2024-05-14 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 131.150, 76.732, 89.588 |
Unit cell angles | 90.00, 113.77, 90.00 |
Refinement procedure
Resolution | 30.850 - 2.500 |
R-factor | 0.1929 |
Rwork | 0.190 |
R-free | 0.24540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.183 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.530 |
High resolution limit [Å] | 2.490 | 6.750 | 2.490 |
Rmerge | 0.101 | 0.026 | 0.677 |
Rmeas | 0.122 | 0.032 | 0.822 |
Rpim | 0.068 | 0.018 | 0.462 |
Total number of observations | 75189 | ||
Number of reflections | 27672 | 1405 | 1366 |
<I/σ(I)> | 6.8 | ||
Completeness [%] | 96.4 | 94 | 95.6 |
Redundancy | 2.7 | 2.7 | 2.7 |
CC(1/2) | 0.997 | 0.998 | 0.713 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 0.1 M succinic acid, 15% PEG3350 |