8ZR1
Cocrystallization of engineered streptavidin with A9 oligo DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-08 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 46.084, 58.006, 57.791 |
Unit cell angles | 90.65, 107.54, 98.84 |
Refinement procedure
Resolution | 37.662 - 2.601 |
R-factor | 0.2016 |
Rwork | 0.198 |
R-free | 0.28150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lng |
RMSD bond length | 0.009 |
RMSD bond angle | 1.160 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 2.690 |
High resolution limit [Å] | 2.600 | 5.600 | 2.600 |
Rmerge | 0.198 | 0.087 | 0.514 |
Rmeas | 0.123 | 0.727 | |
Rpim | 0.140 | 0.087 | 0.514 |
Number of reflections | 16710 | 1672 | 1670 |
<I/σ(I)> | 6 | ||
Completeness [%] | 97.5 | 97.5 | 97.3 |
Redundancy | 1.9 | 1.9 | 1.9 |
CC(1/2) | 0.974 | 0.599 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 8 | 298 | 10 mM Tris-HCl |