8YPY
Crystal strcuture of human phosphoribosyl pyrophosphate synthetase2 (PRPS2) in complex with ligands
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9873 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.701, 73.598, 170.500 |
Unit cell angles | 90.00, 94.44, 90.00 |
Refinement procedure
Resolution | 46.910 - 2.740 |
R-factor | 0.273 |
Rwork | 0.272 |
R-free | 0.28600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2h06 |
RMSD bond length | 0.025 |
RMSD bond angle | 2.345 |
Data reduction software | DENZO |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.910 | 2.800 |
High resolution limit [Å] | 2.740 | 2.750 |
Number of reflections | 54437 | 2202 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 94.1 | |
Redundancy | 4.2 | |
CC(1/2) | 0.689 | 0.687 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.2M Lithium sulfate, 35% MPD |