8WM0
Crystal structure of TNIK-thiopeptide wTP3 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2023-06-15 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 65 |
Unit cell lengths | 53.720, 53.720, 220.170 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.500 - 2.800 |
Rwork | 0.227 |
R-free | 0.28520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7xzq |
RMSD bond length | 0.003 |
RMSD bond angle | 1.250 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.500 | 2.950 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 8896 | 1291 |
<I/σ(I)> | 25.2 | |
Completeness [%] | 100.0 | |
Redundancy | 62.2 | |
CC(1/2) | 0.999 | 0.776 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 283 | 13% Tacsimate pH6.0 |