8W1N
Structure of transthyretin pathogenic mutation A120S
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-07 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9765 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 43.114, 86.280, 64.088 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.570 - 1.600 |
R-factor | 0.2459 |
Rwork | 0.244 |
R-free | 0.28400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.829 |
Data scaling software | HKL-2000 (v722) |
Phasing software | PHENIX (1.21) |
Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.600 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.094 | 2.230 |
Rmeas | 0.102 | 2.400 |
Rpim | 0.037 | 0.855 |
Number of reflections | 31452 | 1493 |
<I/σ(I)> | 20.7 | 1 |
Completeness [%] | 97.7 | 96.1 |
Redundancy | 7.6 | |
CC(1/2) | 0.835 | 0.333 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 0.1 M MES at pH 6.0, 10% (v/v) glycerol, 5% (w/v) PEG 1000, and 30% (v/v) PEG 600 |