8VMF
Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-08-06 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 0.98401 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 82.251, 82.251, 280.354 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 39.070 - 2.500 |
| R-factor | 0.2101 |
| Rwork | 0.209 |
| R-free | 0.25060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4nm7 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.539 |
| Data reduction software | XDS |
| Data scaling software | pointless (1.9.33) |
| Phasing software | PHENIX (1.20.1_4487) |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.070 | 2.600 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.233 | 2.733 |
| Rmeas | 0.263 | 2.935 |
| Rpim | 0.118 | 1.388 |
| Number of reflections | 19517 | 2182 |
| <I/σ(I)> | 4.8 | 0.5 |
| Completeness [%] | 97.0 | 98.9 |
| Redundancy | 4.4 | 4.5 |
| CC(1/2) | 0.986 | 0.188 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICRODIALYSIS | 7.5 | 277 | 10% PEG35000, 20 mM Tris, pH 7.5, 300 mM sodium chloride, 5% glycerol, 10 mM magnesium chloride, 5 mM DTT, 200 uM ADP, 200 uM aluminum nitrate, 1.2 mM sodium fluoride |






