Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VLB

Crystal structure of EloBC-VHL-CDO1 complex bound to compound 4 molecular glue

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-17
DetectorDECTRIS PILATUS3 2M
Wavelength(s)1.00000
Spacegroup nameC 2 2 21
Unit cell lengths116.440, 178.116, 104.166
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution58.220 - 2.900
R-factor0.2105
Rwork0.208
R-free0.25810
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.833
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]97.4603.080
High resolution limit [Å]2.9002.900
Rmerge0.1712.397
Number of reflections232393885
<I/σ(I)>8.10.9
Completeness [%]95.3100
Redundancy6.66.9
CC(1/2)0.9960.411
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2940.2M SODIUM CITRATE, 0.1M BIS-TRIS-PROPANE PH 6.5, 20% PEG3350

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon