8TQ5
Crystal structure of Fab DX17 in complex with MHC-I (HLA-B*44:05)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 273 |
Detector technology | PIXEL |
Collection date | 2021-07-21 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.115, 104.427, 131.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.240 - 2.300 |
R-factor | 0.1945 |
Rwork | 0.193 |
R-free | 0.23440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7tue |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.240 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.083 | 1.500 |
Rpim | 0.029 | 0.509 |
Number of reflections | 46944 | 4508 |
<I/σ(I)> | 17.6 | 1.5 |
Completeness [%] | 97.9 | 95.5 |
Redundancy | 9 | |
CC(1/2) | 0.999 | 0.610 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 12% PEG20000, 0.1 M MES, pH 6.5 |