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8TE1

Crystal structure of the methyltransferase domain of R882H/R676K DNMT3A homotetramer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2021-10-27
DetectorADSC QUANTUM 315r
Wavelength(s)0.97648
Spacegroup nameP 3
Unit cell lengths177.829, 177.829, 110.920
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.060 - 2.480
R-factor0.1929
Rwork0.193
R-free0.22570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5yx2
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.570
High resolution limit [Å]2.4805.3402.480
Rmerge0.1550.0451.930
Rmeas0.1700.0502.129
Rpim0.0710.0210.896
Total number of observations803976
Number of reflections1388991389813907
<I/σ(I)>4.1
Completeness [%]100.0100100
Redundancy5.85.85.6
CC(1/2)0.9990.302
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.2-0.4 M potassium sodium tartrate

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