8T7R
Crystal structure of human leukocyte antigen A*0101 in complex with the Fab of alloreactive antibody E07
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-10-15 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 357.076, 259.582, 255.361 |
| Unit cell angles | 90.00, 133.13, 90.00 |
Refinement procedure
| Resolution | 30.130 - 3.840 |
| R-factor | 0.2171 |
| Rwork | 0.216 |
| R-free | 0.26250 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.776 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (v1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.130 | 3.977 |
| High resolution limit [Å] | 3.840 | 3.890 |
| Rmerge | 0.172 | 0.597 |
| Rmeas | 0.199 | 0.699 |
| Rpim | 0.100 | 0.360 |
| Number of reflections | 154424 | 7737 |
| <I/σ(I)> | 8.05 | 1.77 |
| Completeness [%] | 99.2 | 99.4 |
| Redundancy | 3.8 | |
| CC(1/2) | 0.981 | 0.710 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 294 | sodium citrate tribasic dihydrate, sodium cacodylate |
