8T7F
Structure of the S1 variant of Fab F1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-E |
Synchrotron site | APS |
Beamline | 21-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 80.757, 189.456, 216.468 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 94.730 - 3.500 |
R-factor | 0.2457 |
Rwork | 0.243 |
R-free | 0.30600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dvn |
RMSD bond length | 0.005 |
RMSD bond angle | 0.996 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 95.040 | 3.640 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.178 | 1.001 |
Rmeas | 0.193 | |
Rpim | 0.074 | 0.411 |
Number of reflections | 40200 | 4729 |
<I/σ(I)> | 7.9 | 2.1 |
Completeness [%] | 93.1 | 99 |
Redundancy | 6.7 | 6.7 |
CC(1/2) | 0.997 | 0.789 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 20% PEG3350, 200 mM ammonium sulfate, 100 mM Bis-Tris HCl, pH 6.5 |