8T5X
Probing the dissociation pathway of a kinetically labile transthyretin mutant (A25T)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-09-07 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9765 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 43.780, 86.030, 64.652 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.020 - 1.630 |
R-factor | 0.1904 |
Rwork | 0.188 |
R-free | 0.23360 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.121 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.020 | 1.680 |
High resolution limit [Å] | 1.630 | 1.630 |
Rmerge | 1.770 | |
Rmeas | 0.115 | 1.910 |
Rpim | 0.040 | 0.705 |
Number of reflections | 30727 | 1544 |
<I/σ(I)> | 22.2 | 1.1 |
Completeness [%] | 98.8 | 95.5 |
Redundancy | 7.9 | 6.9 |
CC(1/2) | 0.871 | 0.415 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | In drop 1:1 mixture of sample buffer and crystal condition Buffer :10mg/ml protein, 10 mM phosphate potassium, 100 mM KCl at pH 7.0 Crystal Condition: 0.1 M sodium cacodylate (pH 6.5), 0.2 M calcium acetate and 40 % (w/v) PEG 300 at 277 K |