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8T2D

Ubiquitin variant i53:Mutant T12Y.T14E.L67R with 53BP1 Tudor domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-30
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97939
Spacegroup nameP 21 21 21
Unit cell lengths39.511, 46.855, 91.122
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.850 - 1.751
Rwork0.222
R-free0.27250
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.348
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0411)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.8501.813
High resolution limit [Å]1.7511.751
Rmerge0.060
Rmeas0.065
Rpim0.0250.937
Number of reflections175571636
<I/σ(I)>12.41
Completeness [%]98.994.24
Redundancy6.63.8
CC(1/2)0.9990.386
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2900.1 M MES pH 6.0, 0.2 M Trimethylamine N-oxide dehydrate, 13% w/v PEG MME 2000

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