8SYC
Crystal structure of PDE3B in complex with GSK4394835A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9655 |
Spacegroup name | P 41 |
Unit cell lengths | 78.586, 78.586, 166.339 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.160 - 2.700 |
R-factor | 0.17888 |
Rwork | 0.177 |
R-free | 0.22352 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.336 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 71.160 | 3.022 |
High resolution limit [Å] | 2.680 | 2.680 |
Rmerge | 0.340 | 1.648 |
Number of reflections | 18157 | 907 |
<I/σ(I)> | 6.8 | |
Completeness [%] | 92.7 | 66.6 |
Redundancy | 4.8 | 8.6 |
CC(1/2) | 0.986 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 0.2 M NaCl, 25%PEG3350,0.1 M bis-Tris pH6.5, cryo: 25% ethylene glycol |