8SI0
Structure of binary complex of human cGAS and bound cGAMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 47.927, 59.657, 125.327 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.850 - 2.700 |
R-factor | 0.2231 |
Rwork | 0.217 |
R-free | 0.27960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o67 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.121 |
Data reduction software | XDS (20210205) |
Data scaling software | Aimless (0.7.7) |
Phasing software | MOLREP (11.7.03) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.850 | 2.830 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.064 | 0.161 |
Rmeas | 0.072 | 0.182 |
Rpim | 0.032 | 0.083 |
Total number of observations | 47898 | 6487 |
Number of reflections | 10385 | 1374 |
<I/σ(I)> | 15.3 | 7.3 |
Completeness [%] | 99.7 | |
Redundancy | 4.6 | 4.7 |
CC(1/2) | 0.998 | 0.984 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298.15 | 5 mM magnesium chloride, 0.1 M Tris-HCl, pH 8.5, 8% w/v PEG8000 |