8QB2
Crystal Structure of BRPF1 bromodomain in complex with acetyl-pyrrole derivative compound 79
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 60.490, 60.490, 62.234 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.386 - 1.420 |
R-factor | 0.1693 |
Rwork | 0.168 |
R-free | 0.19640 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.929 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.230 | 1.450 |
High resolution limit [Å] | 1.420 | 1.420 |
Rmerge | 0.041 | 1.601 |
Rmeas | 0.042 | 1.645 |
Rpim | 0.010 | 0.377 |
Total number of observations | 456899 | 24023 |
Number of reflections | 25337 | 1281 |
<I/σ(I)> | 31 | 2 |
Completeness [%] | 100.0 | |
Redundancy | 18 | 18.8 |
CC(1/2) | 1.000 | 0.821 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 0.18 M sodium nitrate, 30% PEG 3350 |