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8OWT

SARS-CoV-2 spike RBD with A8 and H3 nanobodies bound

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-27
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths90.609, 97.197, 117.583
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution58.780 - 2.370
Rwork0.213
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle1.241
Data reduction softwarexia2
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.7802.180
High resolution limit [Å]2.1402.140
Rpim0.088
Number of reflections579172847
<I/σ(I)>6.5
Completeness [%]100.0
Redundancy13.7
CC(1/2)0.9960.324
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293NaCl, potassium citrate pH 4.2, PEG 8000

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