8JEL
Crystal structure of TIGIT in complexed with Ociperlimab, crystal form I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 135.530, 138.310, 196.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.400 - 2.450 |
R-factor | 0.1946 |
Rwork | 0.192 |
R-free | 0.24920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.068 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 135.530 | 10.000 | 2.600 |
High resolution limit [Å] | 2.450 | 7.350 | 2.450 |
Rmerge | 0.208 | 0.080 | 2.824 |
Rmeas | 0.220 | 0.085 | 2.979 |
Number of reflections | 136106 | 5381 | 21993 |
<I/σ(I)> | 5.23 | ||
Completeness [%] | 100.0 | ||
Redundancy | 10.1 | ||
CC(1/2) | 0.994 | 0.997 | 0.561 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M citric acid pH 4.6, 1 M lithium chloride, 7% PEG6000 |