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8ID2

Crystal structure of the ubiquitin-like domain in the SF3A1 subunit of human U2 snRNP complexed with the stem-loop 4 of U1 snRNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-04
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.07000
Spacegroup nameP 21 21 21
Unit cell lengths54.455, 60.214, 103.713
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.390 - 1.800
R-factor0.1965
Rwork0.194
R-free0.23740
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.254
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareSHARP
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.3901.840
High resolution limit [Å]1.8001.800
Rmerge0.0494.198
Rmeas0.0514.362
Rpim0.0141.604
Number of reflections323091809
<I/σ(I)>20.5
Completeness [%]99.795.8
Redundancy13.413.4
CC(1/2)0.9990.458
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277100 mM MIB buffer (pH 5.0), 25% PEG 1500

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