8HOI
Crystal structure of Bcl-2 D103Y in complex with sonrotoclax
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.367, 86.737, 73.395 |
Unit cell angles | 90.00, 105.02, 90.00 |
Refinement procedure
Resolution | 39.710 - 2.250 |
R-factor | 0.2416 |
Rwork | 0.236 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vau |
Data reduction software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.340 | 2.320 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.136 | 0.714 |
Rmeas | 0.147 | 0.771 |
Rpim | 0.055 | 0.288 |
Total number of observations | 281401 | |
Number of reflections | 40244 | 3751 |
<I/σ(I)> | 9.8 | |
Completeness [%] | 95.4 | 96.4 |
Redundancy | 7 | 6.9 |
CC(1/2) | 0.996 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.1 M Sodium Acetate pH 5.1, 3.6 M Sodium Formate, 0.1 M Lithium chloride |