8GKF
Phosphopantetheinyl transferase PptT from Mycobacterium tuberculosis in complex with Raltitrexed.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-01-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979338 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 141.830, 141.830, 209.745 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.080 - 2.450 |
R-factor | 0.2837 |
Rwork | 0.281 |
R-free | 0.32580 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.997 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 117.490 | 2.558 |
High resolution limit [Å] | 2.440 | 2.448 |
Rmerge | 0.259 | 2.086 |
Rmeas | 0.291 | 2.170 |
Rpim | 0.073 | 0.593 |
Number of reflections | 86872 | 4279 |
<I/σ(I)> | 8.3 | 1.4 |
Completeness [%] | 94.5 | |
Redundancy | 13.6 | |
CC(1/2) | 0.998 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289 | K/Na Tartrate, imidazole buffer pH 8.0, 0.2M NaCl |