8G0H
Human PARP1 deltaV687-E688 bound to UKTT5 (compound 10) and to a DNA double strand break.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-06 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1158 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 108.066, 110.172, 117.086 |
Unit cell angles | 90.00, 114.51, 90.00 |
Refinement procedure
Resolution | 76.590 - 3.800 |
R-factor | 0.2436 |
Rwork | 0.240 |
R-free | 0.30560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7s6m |
RMSD bond length | 0.002 |
RMSD bond angle | 0.505 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4159) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 110.170 | 4.060 |
High resolution limit [Å] | 3.800 | 3.800 |
Rmerge | 0.162 | 2.642 |
Rmeas | 0.182 | 2.961 |
Rpim | 0.081 | 1.310 |
Total number of observations | 115824 | 21838 |
Number of reflections | 24750 | 4460 |
<I/σ(I)> | 6.1 | 0.7 |
Completeness [%] | 99.6 | |
Redundancy | 4.7 | 4.9 |
CC(1/2) | 0.998 | 0.226 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 12% PEG6000 and 100 mM MES pH 6.5 |