8FTA
Crystal Structure of the second bromodomain of human Polybromo-1 (PB1) in complex with compound 16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2022-10-27 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 84.657, 49.305, 33.544 |
Unit cell angles | 90.00, 97.75, 90.00 |
Refinement procedure
Resolution | 42.510 - 1.780 |
R-factor | 0.181 |
Rwork | 0.178 |
R-free | 0.20680 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.043 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (v1.20.1-4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.810 |
High resolution limit [Å] | 1.780 | 4.830 | 1.780 |
Rmerge | 0.991 | 0.052 | 0.078 |
Total number of observations | 54031 | ||
Number of reflections | 25465 | 1296 | 1261 |
<I/σ(I)> | 57.9 | ||
Completeness [%] | 98.8 | 100 | 95.8 |
Redundancy | 2.1 | 2.2 | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 0.1 M MES pH 5.5, 14.4% PEG 8000, 10% Ethylene Glycol, 0.01M ZnCl2 |