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8F8W

Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form I

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-09
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.92010
Spacegroup nameP 61
Unit cell lengths170.636, 170.636, 126.419
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.900 - 2.710
R-factor0.2088
Rwork0.208
R-free0.24130
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle2.178
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.750
High resolution limit [Å]2.7102.710
Rpim0.0350.522
Number of reflections567662863
<I/σ(I)>31.11.5
Completeness [%]98.2
Redundancy4.6
CC(1/2)1.0000.604
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M Sodium HEPES 7.5 20 % w/v PEG 8000. Cryopreserved with 12.5% glycerol.

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