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8EZG

Monobody 12D1 bound to KRAS(G12D)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-24
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 64 2 2
Unit cell lengths156.477, 156.477, 64.624
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.170 - 2.520
R-factor0.173
Rwork0.171
R-free0.21310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB entries 7L0G & 5VPZ
RMSD bond length0.008
RMSD bond angle0.936
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: 000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.560
High resolution limit [Å]2.5202.520
Rmerge0.0920.324
Rmeas0.0980.344
Rpim0.0330.113
Number of reflections16221798
<I/σ(I)>20.37.4
Completeness [%]99.999.9
Redundancy8.79
CC(1/2)0.9860.973
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72912.8 M sodium acetate trihydrate

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